Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TNFSF9P41273 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF9P41273 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TNFSF9P41273 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF9P41273 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFSF9P41273 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.29■□□□□ 0.68
TNFSF9P41273 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
TNFSF9P41273 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.29■□□□□ 0.68
TNFSF9P41273 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF9P41273 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFSF9P41273 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF9P41273 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TNFSF9P41273 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF9P41273 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.29■□□□□ 0.68
TNFSF9P41273 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TNFSF9P41273 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF9P41273 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 AC012317.2-201ENST00000623305 2251 ntBASIC19.28■□□□□ 0.68
TNFSF9P41273 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF9P41273 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFSF9P41273 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.28■□□□□ 0.68
TNFSF9P41273 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.28■□□□□ 0.68
TNFSF9P41273 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFSF9P41273 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFSF9P41273 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.28■□□□□ 0.68
TNFSF9P41273 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFSF9P41273 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF9P41273 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TNFSF9P41273 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.28■□□□□ 0.68
TNFSF9P41273 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF9P41273 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF9P41273 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF9P41273 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF9P41273 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF9P41273 FAM220CP-201ENST00000395253 831 ntBASIC19.27■□□□□ 0.68
TNFSF9P41273 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TNFSF9P41273 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF9P41273 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFSF9P41273 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF9P41273 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.27■□□□□ 0.68
TNFSF9P41273 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFSF9P41273 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TNFSF9P41273 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TNFSF9P41273 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFSF9P41273 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.27■□□□□ 0.68
TNFSF9P41273 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.27■□□□□ 0.68
TNFSF9P41273 REXO1L6P-202ENST00000619970 1078 ntBASIC19.27■□□□□ 0.68
TNFSF9P41273 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF9P41273 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF9P41273 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TNFSF9P41273 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF9P41273 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF9P41273 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.27■□□□□ 0.68
TNFSF9P41273 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF9P41273 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF9P41273 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF9P41273 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.27■□□□□ 0.67
TNFSF9P41273 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.27■□□□□ 0.67
TNFSF9P41273 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF9P41273 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.27■□□□□ 0.67
TNFSF9P41273 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF9P41273 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TNFSF9P41273 SIRPAP1-201ENST00000448467 1770 ntBASIC19.27■□□□□ 0.67
TNFSF9P41273 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF9P41273 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
TNFSF9P41273 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF9P41273 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFSF9P41273 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF9P41273 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF9P41273 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF9P41273 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFSF9P41273 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF9P41273 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms