Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.88■■□□□ 1.09
PDE6BP35913 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.88■■□□□ 1.09
PDE6BP35913 AC074386.1-202ENST00000463561 864 ntBASIC21.88■■□□□ 1.09
PDE6BP35913 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.88■■□□□ 1.09
PDE6BP35913 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE6BP35913 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PDE6BP35913 GGTLC5P-201ENST00000617623 998 ntBASIC21.88■■□□□ 1.09
PDE6BP35913 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
PDE6BP35913 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.88■■□□□ 1.09
PDE6BP35913 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6BP35913 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
PDE6BP35913 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE6BP35913 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
PDE6BP35913 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE6BP35913 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE6BP35913 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDE6BP35913 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE6BP35913 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDE6BP35913 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDE6BP35913 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.87■■□□□ 1.09
PDE6BP35913 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC21.87■■□□□ 1.09
PDE6BP35913 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.87■■□□□ 1.09
PDE6BP35913 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.87■■□□□ 1.09
PDE6BP35913 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
PDE6BP35913 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE6BP35913 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.87■■□□□ 1.09
PDE6BP35913 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDE6BP35913 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDE6BP35913 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDE6BP35913 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.86■■□□□ 1.09
PDE6BP35913 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDE6BP35913 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PDE6BP35913 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDE6BP35913 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDE6BP35913 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PDE6BP35913 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.86■■□□□ 1.09
PDE6BP35913 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.86■■□□□ 1.09
PDE6BP35913 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDE6BP35913 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PDE6BP35913 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.86■■□□□ 1.09
PDE6BP35913 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
PDE6BP35913 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PDE6BP35913 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDE6BP35913 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.85■■□□□ 1.09
PDE6BP35913 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
PDE6BP35913 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.85■■□□□ 1.09
PDE6BP35913 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.85■■□□□ 1.09
PDE6BP35913 AC018445.3-201ENST00000624177 1945 ntBASIC21.85■■□□□ 1.09
PDE6BP35913 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.85■■□□□ 1.09
PDE6BP35913 AL139400.1-201ENST00000366220 510 ntBASIC21.85■■□□□ 1.09
PDE6BP35913 AP002414.1-201ENST00000391405 1147 ntBASIC21.85■■□□□ 1.09
PDE6BP35913 PTCHD3P3-201ENST00000403073 906 ntBASIC21.85■■□□□ 1.09
PDE6BP35913 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.85■■□□□ 1.09
PDE6BP35913 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.85■■□□□ 1.09
PDE6BP35913 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.85■■□□□ 1.09
PDE6BP35913 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PDE6BP35913 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PDE6BP35913 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.85■■□□□ 1.09
PDE6BP35913 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
PDE6BP35913 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.85■■□□□ 1.09
PDE6BP35913 AC007064.4-201ENST00000637740 555 ntBASIC21.85■■□□□ 1.09
PDE6BP35913 AC025580.3-201ENST00000617932 1424 ntBASIC21.85■■□□□ 1.09
PDE6BP35913 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PDE6BP35913 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PDE6BP35913 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDE6BP35913 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDE6BP35913 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.84■■□□□ 1.09
PDE6BP35913 PHGDH-209ENST00000641074 1780 ntBASIC21.84■■□□□ 1.09
PDE6BP35913 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.84■■□□□ 1.09
PDE6BP35913 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDE6BP35913 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDE6BP35913 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
PDE6BP35913 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
PDE6BP35913 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.84■■□□□ 1.09
PDE6BP35913 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDE6BP35913 AC004449.1-201ENST00000564240 433 ntBASIC21.84■■□□□ 1.09
PDE6BP35913 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.84■■□□□ 1.09
PDE6BP35913 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.84■■□□□ 1.09
PDE6BP35913 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDE6BP35913 AC004835.2-201ENST00000603762 682 ntBASIC21.84■■□□□ 1.09
PDE6BP35913 AL096865.1-201ENST00000606796 927 ntBASIC21.84■■□□□ 1.09
PDE6BP35913 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDE6BP35913 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDE6BP35913 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.84■■□□□ 1.09
PDE6BP35913 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.84■■□□□ 1.09
PDE6BP35913 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDE6BP35913 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.83■■□□□ 1.09
PDE6BP35913 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.83■■□□□ 1.09
PDE6BP35913 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDE6BP35913 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDE6BP35913 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms