Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC1P35251 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFC1P35251 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.84■□□□□ 0.61
RFC1P35251 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFC1P35251 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFC1P35251 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RFC1P35251 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.84■□□□□ 0.61
RFC1P35251 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RFC1P35251 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC1P35251 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.83■□□□□ 0.61
RFC1P35251 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC1P35251 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC1P35251 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC1P35251 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFC1P35251 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFC1P35251 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RFC1P35251 Z83836.1-201ENST00000624605 1642 ntBASIC18.83■□□□□ 0.61
RFC1P35251 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC1P35251 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RFC1P35251 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RFC1P35251 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC1P35251 TSPY12P-201ENST00000421279 868 ntBASIC18.83■□□□□ 0.6
RFC1P35251 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.83■□□□□ 0.6
RFC1P35251 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC1P35251 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.83■□□□□ 0.6
RFC1P35251 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.83■□□□□ 0.6
RFC1P35251 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC1P35251 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC1P35251 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC1P35251 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC1P35251 LINC00896-202ENST00000609602 2128 ntBASIC18.83■□□□□ 0.6
RFC1P35251 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.83■□□□□ 0.6
RFC1P35251 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFC1P35251 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.83■□□□□ 0.6
RFC1P35251 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.82■□□□□ 0.6
RFC1P35251 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC1P35251 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFC1P35251 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC1P35251 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC1P35251 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC1P35251 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RFC1P35251 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RFC1P35251 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.82■□□□□ 0.6
RFC1P35251 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.82■□□□□ 0.6
RFC1P35251 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RFC1P35251 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.82■□□□□ 0.6
RFC1P35251 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.82■□□□□ 0.6
RFC1P35251 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RFC1P35251 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RFC1P35251 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
RFC1P35251 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RFC1P35251 AL031133.1-201ENST00000406807 723 ntBASIC18.81■□□□□ 0.6
RFC1P35251 AL645929.1-201ENST00000420084 975 ntBASIC18.81■□□□□ 0.6
RFC1P35251 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC1P35251 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RFC1P35251 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
RFC1P35251 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.81■□□□□ 0.6
RFC1P35251 NTF6B-201ENST00000591913 560 ntBASIC18.81■□□□□ 0.6
RFC1P35251 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.81■□□□□ 0.6
RFC1P35251 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RFC1P35251 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms