Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.93■□□□□ 0.46
LSP1P33241 AC034236.2-201ENST00000606662 1610 ntBASIC17.93■□□□□ 0.46
LSP1P33241 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.93■□□□□ 0.46
LSP1P33241 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.93■□□□□ 0.46
LSP1P33241 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
LSP1P33241 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.93■□□□□ 0.46
LSP1P33241 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LSP1P33241 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LSP1P33241 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.92■□□□□ 0.46
LSP1P33241 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 DUSP5P2-201ENST00000426873 1033 ntBASIC17.92■□□□□ 0.46
LSP1P33241 AC090192.1-201ENST00000517740 490 ntBASIC17.92■□□□□ 0.46
LSP1P33241 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
LSP1P33241 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.92■□□□□ 0.46
LSP1P33241 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
LSP1P33241 CROCCP1-201ENST00000426910 5675 ntBASIC17.92■□□□□ 0.46
LSP1P33241 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
LSP1P33241 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.92■□□□□ 0.46
LSP1P33241 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.92■□□□□ 0.46
LSP1P33241 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LSP1P33241 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
LSP1P33241 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LSP1P33241 CYP2T1P-202ENST00000641596 2535 ntBASIC17.92■□□□□ 0.46
LSP1P33241 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LSP1P33241 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LSP1P33241 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LSP1P33241 AC092068.3-201ENST00000587894 2016 ntBASIC17.91■□□□□ 0.46
LSP1P33241 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.91■□□□□ 0.46
LSP1P33241 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.91■□□□□ 0.46
LSP1P33241 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
LSP1P33241 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LSP1P33241 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.91■□□□□ 0.46
LSP1P33241 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.91■□□□□ 0.46
LSP1P33241 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.91■□□□□ 0.46
LSP1P33241 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.91■□□□□ 0.46
LSP1P33241 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.91■□□□□ 0.46
LSP1P33241 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.91■□□□□ 0.46
LSP1P33241 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.91■□□□□ 0.46
LSP1P33241 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.91■□□□□ 0.46
LSP1P33241 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.91■□□□□ 0.46
LSP1P33241 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LSP1P33241 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
LSP1P33241 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.91■□□□□ 0.46
LSP1P33241 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 AC079328.2-201ENST00000561241 3354 ntBASIC17.91■□□□□ 0.46
LSP1P33241 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LSP1P33241 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LSP1P33241 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
LSP1P33241 AC116353.5-201ENST00000638148 1699 ntBASIC17.9■□□□□ 0.46
LSP1P33241 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.9■□□□□ 0.46
LSP1P33241 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.9■□□□□ 0.46
LSP1P33241 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.9■□□□□ 0.46
LSP1P33241 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.9■□□□□ 0.46
LSP1P33241 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.9■□□□□ 0.46
LSP1P33241 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.9■□□□□ 0.46
LSP1P33241 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LSP1P33241 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms