Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HOXA11P31270 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXA11P31270 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HOXA11P31270 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 HLA-J-201ENST00000462773 1622 ntBASIC19.23■□□□□ 0.67
HOXA11P31270 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXA11P31270 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.23■□□□□ 0.67
HOXA11P31270 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA11P31270 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 AC138028.4-201ENST00000564984 1845 ntBASIC19.23■□□□□ 0.67
HOXA11P31270 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
HOXA11P31270 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA11P31270 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA11P31270 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXA11P31270 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA11P31270 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA11P31270 BX276092.7-203ENST00000637198 1536 ntBASIC19.22■□□□□ 0.67
HOXA11P31270 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA11P31270 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA11P31270 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA11P31270 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXA11P31270 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA11P31270 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HOXA11P31270 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA11P31270 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA11P31270 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HOXA11P31270 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA11P31270 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXA11P31270 AC148477.5-201ENST00000625164 1645 ntBASIC19.22■□□□□ 0.67
HOXA11P31270 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.21■□□□□ 0.67
HOXA11P31270 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.21■□□□□ 0.67
HOXA11P31270 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 ABALON-201ENST00000629058 1903 ntBASIC19.21■□□□□ 0.67
HOXA11P31270 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA11P31270 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA11P31270 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HOXA11P31270 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HOXA11P31270 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HOXA11P31270 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA11P31270 AL020989.1-201ENST00000422979 469 ntBASIC19.2■□□□□ 0.66
HOXA11P31270 LAGE3P1-201ENST00000425356 484 ntBASIC19.2■□□□□ 0.66
HOXA11P31270 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
HOXA11P31270 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms