Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM21P19474 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM21P19474 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM21P19474 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM21P19474 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM21P19474 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM21P19474 AC139713.2-201ENST00000641328 2723 ntBASIC19.72■□□□□ 0.75
TRIM21P19474 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM21P19474 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM21P19474 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM21P19474 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM21P19474 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM21P19474 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
TRIM21P19474 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM21P19474 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM21P19474 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRIM21P19474 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM21P19474 STARP1-201ENST00000397973 869 ntBASIC19.71■□□□□ 0.75
TRIM21P19474 FAM8A6P-201ENST00000407496 1135 ntBASIC19.71■□□□□ 0.75
TRIM21P19474 AC104076.2-201ENST00000448912 469 ntBASIC19.71■□□□□ 0.75
TRIM21P19474 AC063952.2-201ENST00000498792 1227 ntBASIC19.71■□□□□ 0.75
TRIM21P19474 AC022616.7-201ENST00000525383 220 ntBASIC19.71■□□□□ 0.75
TRIM21P19474 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRIM21P19474 AC010240.3-201ENST00000607688 395 ntBASIC19.71■□□□□ 0.75
TRIM21P19474 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM21P19474 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM21P19474 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM21P19474 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
TRIM21P19474 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM21P19474 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
TRIM21P19474 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM21P19474 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
TRIM21P19474 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM21P19474 SEC1P-202ENST00000473944 940 ntBASIC19.7■□□□□ 0.74
TRIM21P19474 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM21P19474 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM21P19474 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM21P19474 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.7■□□□□ 0.74
TRIM21P19474 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM21P19474 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM21P19474 AL441883.1-201ENST00000566170 1045 ntBASIC19.7■□□□□ 0.74
TRIM21P19474 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM21P19474 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 MIR3917-201ENST00000580971 93 ntBASIC19.7■□□□□ 0.74
TRIM21P19474 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM21P19474 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM21P19474 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM21P19474 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
TRIM21P19474 AL645608.8-201ENST00000606034 2086 ntBASIC19.7■□□□□ 0.74
TRIM21P19474 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM21P19474 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM21P19474 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM21P19474 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM21P19474 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM21P19474 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRIM21P19474 PP12613-201ENST00000424958 2230 ntBASIC19.7■□□□□ 0.74
TRIM21P19474 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRIM21P19474 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRIM21P19474 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM21P19474 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 AC008687.5-201ENST00000593746 558 ntBASIC19.69■□□□□ 0.74
TRIM21P19474 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM21P19474 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms