Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NELFEP18615 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.66■□□□□ 0.42
NELFEP18615 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NELFEP18615 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NELFEP18615 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.66■□□□□ 0.42
NELFEP18615 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
NELFEP18615 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.66■□□□□ 0.42
NELFEP18615 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.66■□□□□ 0.42
NELFEP18615 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 AP000593.1-201ENST00000393668 712 ntBASIC17.66■□□□□ 0.42
NELFEP18615 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.66■□□□□ 0.42
NELFEP18615 CHCHD2P8-201ENST00000429873 447 ntBASIC17.66■□□□□ 0.42
NELFEP18615 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.66■□□□□ 0.42
NELFEP18615 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.66■□□□□ 0.42
NELFEP18615 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.66■□□□□ 0.42
NELFEP18615 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NELFEP18615 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NELFEP18615 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NELFEP18615 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.66■□□□□ 0.42
NELFEP18615 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NELFEP18615 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.65■□□□□ 0.42
NELFEP18615 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.65■□□□□ 0.42
NELFEP18615 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.65■□□□□ 0.42
NELFEP18615 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.65■□□□□ 0.42
NELFEP18615 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.65■□□□□ 0.42
NELFEP18615 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.65■□□□□ 0.42
NELFEP18615 AP002383.4-201ENST00000442518 975 ntBASIC17.65■□□□□ 0.42
NELFEP18615 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.65■□□□□ 0.42
NELFEP18615 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.65■□□□□ 0.42
NELFEP18615 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.65■□□□□ 0.42
NELFEP18615 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.65■□□□□ 0.42
NELFEP18615 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.65■□□□□ 0.42
NELFEP18615 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.65■□□□□ 0.42
NELFEP18615 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NELFEP18615 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.65■□□□□ 0.42
NELFEP18615 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 AC073592.3-201ENST00000625118 1834 ntBASIC17.65■□□□□ 0.42
NELFEP18615 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NELFEP18615 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
NELFEP18615 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NELFEP18615 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NELFEP18615 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NELFEP18615 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NELFEP18615 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NELFEP18615 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 AP003733.1-201ENST00000491725 852 ntBASIC17.64■□□□□ 0.41
NELFEP18615 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.64■□□□□ 0.41
NELFEP18615 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 MIR3180-1-201ENST00000580374 94 ntBASIC17.64■□□□□ 0.41
NELFEP18615 MIR3180-3-201ENST00000584616 94 ntBASIC17.64■□□□□ 0.41
NELFEP18615 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NELFEP18615 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NELFEP18615 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms