Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 AC003669.1-201ENST00000334569 611 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.76■□□□□ 0.75
SMPD1P17405 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.76■□□□□ 0.75
SMPD1P17405 CRYGEP-201ENST00000412192 528 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 MCCD1P2-201ENST00000423228 335 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 DNAJB3-202ENST00000449667 1266 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 SIGLEC30P-201ENST00000455569 941 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 AC108073.2-201ENST00000464002 357 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.76■□□□□ 0.75
SMPD1P17405 AC109462.3-201ENST00000573934 613 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 AC092865.6-201ENST00000642101 219 ntBASIC19.76■□□□□ 0.75
SMPD1P17405 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SMPD1P17405 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.76■□□□□ 0.75
SMPD1P17405 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMPD1P17405 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.76■□□□□ 0.75
SMPD1P17405 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.76■□□□□ 0.75
SMPD1P17405 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.75■□□□□ 0.75
SMPD1P17405 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SMPD1P17405 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD1P17405 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.75■□□□□ 0.75
SMPD1P17405 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SMPD1P17405 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
SMPD1P17405 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.75■□□□□ 0.75
SMPD1P17405 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD1P17405 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.75■□□□□ 0.75
SMPD1P17405 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.75■□□□□ 0.75
SMPD1P17405 RPS15P9-201ENST00000494093 319 ntBASIC19.75■□□□□ 0.75
SMPD1P17405 IGHV3-65-201ENST00000523210 341 ntBASIC19.75■□□□□ 0.75
SMPD1P17405 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.75■□□□□ 0.75
SMPD1P17405 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.75■□□□□ 0.75
SMPD1P17405 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.75■□□□□ 0.75
SMPD1P17405 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD1P17405 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SMPD1P17405 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD1P17405 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMPD1P17405 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.75■□□□□ 0.75
SMPD1P17405 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SMPD1P17405 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 AC018445.3-201ENST00000624177 1945 ntBASIC19.74■□□□□ 0.75
SMPD1P17405 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
SMPD1P17405 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SMPD1P17405 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.74■□□□□ 0.75
SMPD1P17405 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
SMPD1P17405 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SMPD1P17405 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.74■□□□□ 0.75
SMPD1P17405 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SMPD1P17405 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SMPD1P17405 AC211486.1-202ENST00000416371 468 ntBASIC19.74■□□□□ 0.75
SMPD1P17405 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.74■□□□□ 0.75
SMPD1P17405 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.74■□□□□ 0.75
SMPD1P17405 VN2R19P-201ENST00000442399 1052 ntBASIC19.74■□□□□ 0.75
SMPD1P17405 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.74■□□□□ 0.75
SMPD1P17405 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.74■□□□□ 0.75
SMPD1P17405 AC211476.1-201ENST00000503899 468 ntBASIC19.74■□□□□ 0.75
SMPD1P17405 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.74■□□□□ 0.75
SMPD1P17405 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.74■□□□□ 0.75
SMPD1P17405 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.74■□□□□ 0.75
SMPD1P17405 AC018845.2-201ENST00000568326 409 ntBASIC19.74■□□□□ 0.75
SMPD1P17405 MIR4751-201ENST00000578027 74 ntBASIC19.74■□□□□ 0.75
SMPD1P17405 AC008667.4-201ENST00000607370 168 ntBASIC19.74■□□□□ 0.75
SMPD1P17405 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.74■□□□□ 0.75
SMPD1P17405 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.74■□□□□ 0.75
SMPD1P17405 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMPD1P17405 WIZP1-201ENST00000531444 2299 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms