Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NCK1P16333 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NCK1P16333 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NCK1P16333 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NCK1P16333 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NCK1P16333 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NCK1P16333 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.88■□□□□ 0.29
NCK1P16333 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.88■□□□□ 0.29
NCK1P16333 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.88■□□□□ 0.29
NCK1P16333 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.88■□□□□ 0.29
NCK1P16333 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NCK1P16333 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 CR769767.2-201ENST00000622735 460 ntBASIC16.88■□□□□ 0.29
NCK1P16333 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.88■□□□□ 0.29
NCK1P16333 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
NCK1P16333 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
NCK1P16333 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.88■□□□□ 0.29
NCK1P16333 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.88■□□□□ 0.29
NCK1P16333 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NCK1P16333 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NCK1P16333 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 KRT8P7-201ENST00000533003 1432 ntBASIC16.87■□□□□ 0.29
NCK1P16333 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NCK1P16333 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.87■□□□□ 0.29
NCK1P16333 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NCK1P16333 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 CROCCP1-201ENST00000426910 5675 ntBASIC16.87■□□□□ 0.29
NCK1P16333 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.87■□□□□ 0.29
NCK1P16333 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.87■□□□□ 0.29
NCK1P16333 AC116562.2-201ENST00000507042 360 ntBASIC16.87■□□□□ 0.29
NCK1P16333 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.87■□□□□ 0.29
NCK1P16333 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.87■□□□□ 0.29
NCK1P16333 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NCK1P16333 HLA-J-201ENST00000462773 1622 ntBASIC16.87■□□□□ 0.29
NCK1P16333 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
NCK1P16333 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.87■□□□□ 0.29
NCK1P16333 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NCK1P16333 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.87■□□□□ 0.29
NCK1P16333 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.87■□□□□ 0.29
NCK1P16333 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.87■□□□□ 0.29
NCK1P16333 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCK1P16333 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.86■□□□□ 0.29
NCK1P16333 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NCK1P16333 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NCK1P16333 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.86■□□□□ 0.29
NCK1P16333 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NCK1P16333 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms