Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PCDHB18P-201ENST00000524813 2368 ntBASIC18.75■□□□□ 0.59
PDGFRAP16234 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDGFRAP16234 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PDGFRAP16234 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 MTCL1P1-201ENST00000446207 792 ntBASIC18.75■□□□□ 0.59
PDGFRAP16234 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.75■□□□□ 0.59
PDGFRAP16234 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.75■□□□□ 0.59
PDGFRAP16234 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.75■□□□□ 0.59
PDGFRAP16234 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.75■□□□□ 0.59
PDGFRAP16234 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDGFRAP16234 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDGFRAP16234 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDGFRAP16234 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDGFRAP16234 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.74■□□□□ 0.59
PDGFRAP16234 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.74■□□□□ 0.59
PDGFRAP16234 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PDGFRAP16234 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDGFRAP16234 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.74■□□□□ 0.59
PDGFRAP16234 KRT8P47-201ENST00000604727 1398 ntBASIC18.74■□□□□ 0.59
PDGFRAP16234 BX276092.5-203ENST00000456199 560 ntBASIC18.74■□□□□ 0.59
PDGFRAP16234 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFRAP16234 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.74■□□□□ 0.59
PDGFRAP16234 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.74■□□□□ 0.59
PDGFRAP16234 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.74■□□□□ 0.59
PDGFRAP16234 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.74■□□□□ 0.59
PDGFRAP16234 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.74■□□□□ 0.59
PDGFRAP16234 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 AL121672.3-201ENST00000608644 468 ntBASIC18.74■□□□□ 0.59
PDGFRAP16234 AC116407.2-201ENST00000613639 860 ntBASIC18.74■□□□□ 0.59
PDGFRAP16234 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.74■□□□□ 0.59
PDGFRAP16234 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDGFRAP16234 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFRAP16234 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFRAP16234 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDGFRAP16234 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFRAP16234 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDGFRAP16234 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFRAP16234 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFRAP16234 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFRAP16234 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.73■□□□□ 0.59
PDGFRAP16234 GUSBP12-201ENST00000513727 720 ntBASIC18.73■□□□□ 0.59
PDGFRAP16234 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
PDGFRAP16234 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.73■□□□□ 0.59
PDGFRAP16234 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFRAP16234 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.73■□□□□ 0.59
PDGFRAP16234 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFRAP16234 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFRAP16234 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDGFRAP16234 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFRAP16234 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.73■□□□□ 0.59
PDGFRAP16234 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
PDGFRAP16234 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFRAP16234 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDGFRAP16234 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.73■□□□□ 0.59
PDGFRAP16234 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.72■□□□□ 0.59
PDGFRAP16234 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDGFRAP16234 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PDGFRAP16234 AC009949.1-201ENST00000623048 1830 ntBASIC18.72■□□□□ 0.59
PDGFRAP16234 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFRAP16234 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFRAP16234 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 AC016734.2-201ENST00000624325 1377 ntBASIC18.72■□□□□ 0.59
PDGFRAP16234 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.72■□□□□ 0.59
PDGFRAP16234 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.72■□□□□ 0.59
PDGFRAP16234 KRT8P26-201ENST00000534154 1276 ntBASIC18.72■□□□□ 0.59
PDGFRAP16234 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDGFRAP16234 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
PDGFRAP16234 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.72■□□□□ 0.59
PDGFRAP16234 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PDGFRAP16234 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.72■□□□□ 0.59
PDGFRAP16234 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDGFRAP16234 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms