Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.73■□□□□ 0.91
CALM3P0DP25 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.73■□□□□ 0.91
CALM3P0DP25 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.73■□□□□ 0.91
CALM3P0DP25 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CALM3P0DP25 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CALM3P0DP25 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CALM3P0DP25 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CALM3P0DP25 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CALM3P0DP25 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CALM3P0DP25 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CALM3P0DP25 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CALM3P0DP25 COX5BP2-201ENST00000392354 334 ntBASIC20.72■□□□□ 0.91
CALM3P0DP25 POM121L3P-201ENST00000419331 1163 ntBASIC20.72■□□□□ 0.91
CALM3P0DP25 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.72■□□□□ 0.91
CALM3P0DP25 MIR3652-201ENST00000579335 131 ntBASIC20.72■□□□□ 0.91
CALM3P0DP25 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.72■□□□□ 0.91
CALM3P0DP25 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.72■□□□□ 0.91
CALM3P0DP25 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CALM3P0DP25 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CALM3P0DP25 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CALM3P0DP25 AC010460.3-201ENST00000511359 1579 ntBASIC20.72■□□□□ 0.91
CALM3P0DP25 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.72■□□□□ 0.91
CALM3P0DP25 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.71■□□□□ 0.91
CALM3P0DP25 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.71■□□□□ 0.91
CALM3P0DP25 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.71■□□□□ 0.91
CALM3P0DP25 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CALM3P0DP25 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.71■□□□□ 0.91
CALM3P0DP25 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.71■□□□□ 0.91
CALM3P0DP25 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.71■□□□□ 0.91
CALM3P0DP25 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.71■□□□□ 0.91
CALM3P0DP25 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.71■□□□□ 0.91
CALM3P0DP25 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.71■□□□□ 0.91
CALM3P0DP25 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
CALM3P0DP25 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.71■□□□□ 0.91
CALM3P0DP25 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.71■□□□□ 0.91
CALM3P0DP25 AC011467.2-201ENST00000598425 242 ntBASIC20.71■□□□□ 0.91
CALM3P0DP25 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CALM3P0DP25 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.71■□□□□ 0.91
CALM3P0DP25 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.71■□□□□ 0.91
CALM3P0DP25 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.71■□□□□ 0.91
CALM3P0DP25 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.71■□□□□ 0.91
CALM3P0DP25 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CALM3P0DP25 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.7■□□□□ 0.9
CALM3P0DP25 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CALM3P0DP25 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 TP73-AS1-210ENST00000637775 1455 ntBASIC20.7■□□□□ 0.9
CALM3P0DP25 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 FAM220CP-201ENST00000395253 831 ntBASIC20.7■□□□□ 0.9
CALM3P0DP25 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.7■□□□□ 0.9
CALM3P0DP25 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.7■□□□□ 0.9
CALM3P0DP25 NUS1P1-201ENST00000446295 882 ntBASIC20.7■□□□□ 0.9
CALM3P0DP25 AC122714.2-201ENST00000502787 707 ntBASIC20.7■□□□□ 0.9
CALM3P0DP25 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.7■□□□□ 0.9
CALM3P0DP25 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
CALM3P0DP25 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.7■□□□□ 0.9
CALM3P0DP25 BNIP3P18-201ENST00000593976 575 ntBASIC20.7■□□□□ 0.9
CALM3P0DP25 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CALM3P0DP25 AC099336.1-202ENST00000602961 463 ntBASIC20.7■□□□□ 0.9
CALM3P0DP25 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CALM3P0DP25 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CALM3P0DP25 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CALM3P0DP25 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALM3P0DP25 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALM3P0DP25 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALM3P0DP25 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.69■□□□□ 0.9
CALM3P0DP25 GNAS-203ENST00000306120 1878 ntBASIC20.69■□□□□ 0.9
CALM3P0DP25 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms