Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC175P0C221 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC175P0C221 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC175P0C221 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC175P0C221 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC175P0C221 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC175P0C221 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC175P0C221 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC175P0C221 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC175P0C221 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC175P0C221 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC175P0C221 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC175P0C221 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC175P0C221 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC175P0C221 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CCDC175P0C221 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC175P0C221 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC175P0C221 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC175P0C221 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC175P0C221 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC175P0C221 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.28■□□□□ 0.68
CCDC175P0C221 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 LINC01451-201ENST00000623792 534 ntBASIC19.28■□□□□ 0.68
CCDC175P0C221 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC175P0C221 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC175P0C221 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC175P0C221 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC175P0C221 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC175P0C221 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC175P0C221 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC175P0C221 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC175P0C221 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC175P0C221 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 AC073648.6-201ENST00000641589 218 ntBASIC19.27■□□□□ 0.68
CCDC175P0C221 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC175P0C221 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC175P0C221 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CCDC175P0C221 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC175P0C221 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC175P0C221 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC175P0C221 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CCDC175P0C221 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CCDC175P0C221 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC175P0C221 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC175P0C221 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC175P0C221 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC175P0C221 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCDC175P0C221 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC175P0C221 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC175P0C221 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC175P0C221 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC175P0C221 AC104390.1-201ENST00000555663 520 ntBASIC19.26■□□□□ 0.67
CCDC175P0C221 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC175P0C221 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC175P0C221 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC175P0C221 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC175P0C221 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC175P0C221 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC175P0C221 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC175P0C221 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC175P0C221 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms