Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
FREM3P0C091 AC104692.2-201ENST00000603054 253 ntBASIC16.2■□□□□ 0.18
FREM3P0C091 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.2■□□□□ 0.18
FREM3P0C091 AL691432.3-201ENST00000621860 400 ntBASIC16.2■□□□□ 0.18
FREM3P0C091 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
FREM3P0C091 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.2■□□□□ 0.18
FREM3P0C091 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.19■□□□□ 0.18
FREM3P0C091 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FREM3P0C091 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
FREM3P0C091 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.19■□□□□ 0.18
FREM3P0C091 MINOS1P3-201ENST00000457048 203 ntBASIC16.19■□□□□ 0.18
FREM3P0C091 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.19■□□□□ 0.18
FREM3P0C091 AL160237.2-201ENST00000556165 472 ntBASIC16.19■□□□□ 0.18
FREM3P0C091 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.19■□□□□ 0.18
FREM3P0C091 AL671883.3-201ENST00000603274 991 ntBASIC16.19■□□□□ 0.18
FREM3P0C091 AC120114.3-201ENST00000611923 658 ntBASIC16.19■□□□□ 0.18
FREM3P0C091 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FREM3P0C091 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.19■□□□□ 0.18
FREM3P0C091 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 MRPL3P1-201ENST00000400109 1033 ntBASIC16.19■□□□□ 0.18
FREM3P0C091 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.19■□□□□ 0.18
FREM3P0C091 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.19■□□□□ 0.18
FREM3P0C091 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.19■□□□□ 0.18
FREM3P0C091 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.19■□□□□ 0.18
FREM3P0C091 AL773604.1-201ENST00000617417 272 ntBASIC16.19■□□□□ 0.18
FREM3P0C091 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FREM3P0C091 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 AKR1C7P-201ENST00000305623 895 ntBASIC16.18■□□□□ 0.18
FREM3P0C091 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.18■□□□□ 0.18
FREM3P0C091 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.18■□□□□ 0.18
FREM3P0C091 FDX1P1-201ENST00000449115 551 ntBASIC16.18■□□□□ 0.18
FREM3P0C091 AC009078.2-202ENST00000463353 338 ntBASIC16.18■□□□□ 0.18
FREM3P0C091 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.18■□□□□ 0.18
FREM3P0C091 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.18■□□□□ 0.18
FREM3P0C091 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.18■□□□□ 0.18
FREM3P0C091 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FREM3P0C091 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FREM3P0C091 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.18■□□□□ 0.18
FREM3P0C091 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.18■□□□□ 0.18
FREM3P0C091 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
FREM3P0C091 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FREM3P0C091 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.18■□□□□ 0.18
FREM3P0C091 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
FREM3P0C091 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.18■□□□□ 0.18
FREM3P0C091 AP000997.3-201ENST00000623333 2250 ntBASIC16.18■□□□□ 0.18
FREM3P0C091 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.18■□□□□ 0.18
FREM3P0C091 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.18■□□□□ 0.18
FREM3P0C091 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
FREM3P0C091 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.18■□□□□ 0.18
FREM3P0C091 AP002469.2-201ENST00000531724 424 ntBASIC16.18■□□□□ 0.18
FREM3P0C091 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.18■□□□□ 0.18
FREM3P0C091 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
FREM3P0C091 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.18■□□□□ 0.18
FREM3P0C091 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
FREM3P0C091 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms