Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HOXC6P09630 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HOXC6P09630 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXC6P09630 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 MKNK2P1-201ENST00000437526 628 ntBASIC20.06■□□□□ 0.8
HOXC6P09630 NCF1C-201ENST00000438382 1427 ntBASIC20.06■□□□□ 0.8
HOXC6P09630 METTL21AP1-201ENST00000438852 635 ntBASIC20.06■□□□□ 0.8
HOXC6P09630 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXC6P09630 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 RFPL4AP1-201ENST00000530883 850 ntBASIC20.06■□□□□ 0.8
HOXC6P09630 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXC6P09630 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
HOXC6P09630 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXC6P09630 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXC6P09630 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXC6P09630 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXC6P09630 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXC6P09630 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXC6P09630 AC093503.3-201ENST00000624917 2352 ntBASIC20.06■□□□□ 0.8
HOXC6P09630 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXC6P09630 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HOXC6P09630 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HOXC6P09630 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HOXC6P09630 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXC6P09630 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
HOXC6P09630 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HOXC6P09630 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.05■□□□□ 0.8
HOXC6P09630 SNHG9-202ENST00000564014 471 ntBASIC20.05■□□□□ 0.8
HOXC6P09630 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXC6P09630 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXC6P09630 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HOXC6P09630 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXC6P09630 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXC6P09630 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.05■□□□□ 0.8
HOXC6P09630 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXC6P09630 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 HTR5BP-201ENST00000430851 1154 ntBASIC20.04■□□□□ 0.8
HOXC6P09630 CYMP-203ENST00000474680 1263 ntBASIC20.04■□□□□ 0.8
HOXC6P09630 RPS15P9-201ENST00000494093 319 ntBASIC20.04■□□□□ 0.8
HOXC6P09630 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXC6P09630 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 AC148477.5-201ENST00000625164 1645 ntBASIC20.04■□□□□ 0.8
HOXC6P09630 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HOXC6P09630 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXC6P09630 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HOXC6P09630 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXC6P09630 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXC6P09630 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXC6P09630 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXC6P09630 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HOXC6P09630 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXC6P09630 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC6P09630 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC6P09630 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC6P09630 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXC6P09630 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
HOXC6P09630 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXC6P09630 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HOXC6P09630 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HOXC6P09630 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXC6P09630 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HOXC6P09630 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HOXC6P09630 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
HOXC6P09630 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.03■□□□□ 0.8
HOXC6P09630 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.03■□□□□ 0.8
HOXC6P09630 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.03■□□□□ 0.8
HOXC6P09630 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXC6P09630 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms