Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
COL1A2P08123 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COL1A2P08123 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.5■□□□□ 0.71
COL1A2P08123 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COL1A2P08123 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.5■□□□□ 0.71
COL1A2P08123 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
COL1A2P08123 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
COL1A2P08123 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A2P08123 AP002414.3-201ENST00000589352 1468 ntBASIC19.49■□□□□ 0.71
COL1A2P08123 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.49■□□□□ 0.71
COL1A2P08123 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A2P08123 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A2P08123 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.49■□□□□ 0.71
COL1A2P08123 IGHV3-52-201ENST00000519770 353 ntBASIC19.49■□□□□ 0.71
COL1A2P08123 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A2P08123 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.49■□□□□ 0.71
COL1A2P08123 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.49■□□□□ 0.71
COL1A2P08123 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL1A2P08123 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COL1A2P08123 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 AC004408.2-201ENST00000623613 2777 ntBASIC19.49■□□□□ 0.71
COL1A2P08123 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.49■□□□□ 0.71
COL1A2P08123 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL1A2P08123 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL1A2P08123 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL1A2P08123 AC148477.5-201ENST00000625164 1645 ntBASIC19.48■□□□□ 0.71
COL1A2P08123 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.48■□□□□ 0.71
COL1A2P08123 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.48■□□□□ 0.71
COL1A2P08123 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.48■□□□□ 0.71
COL1A2P08123 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
COL1A2P08123 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL1A2P08123 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.48■□□□□ 0.71
COL1A2P08123 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.48■□□□□ 0.71
COL1A2P08123 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.48■□□□□ 0.71
COL1A2P08123 Z83851.2-201ENST00000609564 659 ntBASIC19.48■□□□□ 0.71
COL1A2P08123 PGM5P2-202ENST00000637225 1043 ntBASIC19.48■□□□□ 0.71
COL1A2P08123 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL1A2P08123 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.48■□□□□ 0.71
COL1A2P08123 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
COL1A2P08123 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.48■□□□□ 0.71
COL1A2P08123 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.48■□□□□ 0.71
COL1A2P08123 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL1A2P08123 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
COL1A2P08123 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.47■□□□□ 0.71
COL1A2P08123 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 MYCLP1-201ENST00000372451 1075 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.47■□□□□ 0.71
COL1A2P08123 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.47■□□□□ 0.71
COL1A2P08123 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.47■□□□□ 0.71
COL1A2P08123 AC005104.2-201ENST00000427818 678 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.47■□□□□ 0.71
COL1A2P08123 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.47■□□□□ 0.71
COL1A2P08123 SIGLEC30P-201ENST00000455569 941 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.47■□□□□ 0.71
COL1A2P08123 RNA5SP415-201ENST00000517246 115 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 AC034105.1-201ENST00000563488 319 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.47■□□□□ 0.71
COL1A2P08123 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COL1A2P08123 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.47■□□□□ 0.71
COL1A2P08123 AL356488.2-201ENST00000602755 427 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 MIR1199-201ENST00000621445 119 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.47■□□□□ 0.71
COL1A2P08123 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 AC104109.2-201ENST00000602919 1418 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.47■□□□□ 0.71
COL1A2P08123 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
COL1A2P08123 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 AC004817.3-201ENST00000602957 2129 ntBASIC19.47■□□□□ 0.71
COL1A2P08123 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL1A2P08123 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL1A2P08123 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
COL1A2P08123 NCF1C-201ENST00000438382 1427 ntBASIC19.46■□□□□ 0.71
COL1A2P08123 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL1A2P08123 AC073621.1-201ENST00000392730 636 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms