Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.22■□□□□ 0.51
MT-ND3P03897 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.22■□□□□ 0.51
MT-ND3P03897 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MT-ND3P03897 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
MT-ND3P03897 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
MT-ND3P03897 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
MT-ND3P03897 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-ND3P03897 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MT-ND3P03897 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
MT-ND3P03897 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.21■□□□□ 0.51
MT-ND3P03897 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.21■□□□□ 0.51
MT-ND3P03897 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
MT-ND3P03897 AL023803.3-201ENST00000615559 522 ntBASIC18.21■□□□□ 0.51
MT-ND3P03897 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
MT-ND3P03897 AL031432.5-201ENST00000641059 760 ntBASIC18.21■□□□□ 0.51
MT-ND3P03897 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-ND3P03897 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
MT-ND3P03897 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
MT-ND3P03897 AC036111.1-201ENST00000533973 1582 ntBASIC18.21■□□□□ 0.51
MT-ND3P03897 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
MT-ND3P03897 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.2■□□□□ 0.5
MT-ND3P03897 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MT-ND3P03897 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND3P03897 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
MT-ND3P03897 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND3P03897 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND3P03897 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.2■□□□□ 0.5
MT-ND3P03897 AC022616.7-201ENST00000525383 220 ntBASIC18.2■□□□□ 0.5
MT-ND3P03897 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MT-ND3P03897 AL138966.2-201ENST00000621997 464 ntBASIC18.2■□□□□ 0.5
MT-ND3P03897 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-ND3P03897 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.2■□□□□ 0.5
MT-ND3P03897 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND3P03897 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND3P03897 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND3P03897 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MT-ND3P03897 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-ND3P03897 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
MT-ND3P03897 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 RNF152P1-201ENST00000397754 604 ntBASIC18.19■□□□□ 0.5
MT-ND3P03897 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 COX11P1-201ENST00000489116 835 ntBASIC18.19■□□□□ 0.5
MT-ND3P03897 AC063952.2-201ENST00000498792 1227 ntBASIC18.19■□□□□ 0.5
MT-ND3P03897 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-ND3P03897 WWOX-216ENST00000569818 525 ntBASIC18.19■□□□□ 0.5
MT-ND3P03897 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-ND3P03897 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND3P03897 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms