Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.16□□□□□ -0.14
IFNA1P01562 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.16□□□□□ -0.14
IFNA1P01562 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.16□□□□□ -0.14
IFNA1P01562 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
IFNA1P01562 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.16□□□□□ -0.14
IFNA1P01562 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.16□□□□□ -0.14
IFNA1P01562 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
IFNA1P01562 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.16□□□□□ -0.14
IFNA1P01562 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.16□□□□□ -0.14
IFNA1P01562 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.16□□□□□ -0.14
IFNA1P01562 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.16□□□□□ -0.14
IFNA1P01562 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
IFNA1P01562 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
IFNA1P01562 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
IFNA1P01562 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 AL512625.2-201ENST00000417533 625 ntBASIC14.15□□□□□ -0.14
IFNA1P01562 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.15□□□□□ -0.14
IFNA1P01562 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.15□□□□□ -0.14
IFNA1P01562 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.15□□□□□ -0.14
IFNA1P01562 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.15□□□□□ -0.14
IFNA1P01562 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.15□□□□□ -0.14
IFNA1P01562 KRT18P61-201ENST00000585825 1298 ntBASIC14.15□□□□□ -0.14
IFNA1P01562 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 AL121832.2-201ENST00000610979 668 ntBASIC14.15□□□□□ -0.14
IFNA1P01562 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.15□□□□□ -0.14
IFNA1P01562 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.15□□□□□ -0.14
IFNA1P01562 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 AC093010.1-201ENST00000473625 1624 ntBASIC14.15□□□□□ -0.14
IFNA1P01562 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
IFNA1P01562 MST1L-201ENST00000442552 2185 ntBASIC14.15□□□□□ -0.15
IFNA1P01562 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.14□□□□□ -0.15
IFNA1P01562 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
IFNA1P01562 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
IFNA1P01562 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
IFNA1P01562 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.14□□□□□ -0.15
IFNA1P01562 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
IFNA1P01562 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 JTB-203ENST00000368589 1216 ntTSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.14□□□□□ -0.15
IFNA1P01562 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.14□□□□□ -0.15
IFNA1P01562 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms