Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.84■□□□□ 0.45
PDGFBP01127 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.84■□□□□ 0.45
PDGFBP01127 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PDGFBP01127 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.83■□□□□ 0.45
PDGFBP01127 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PDGFBP01127 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFBP01127 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFBP01127 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PDGFBP01127 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.83■□□□□ 0.45
PDGFBP01127 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.83■□□□□ 0.45
PDGFBP01127 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.83■□□□□ 0.45
PDGFBP01127 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDGFBP01127 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.83■□□□□ 0.44
PDGFBP01127 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFBP01127 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFBP01127 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDGFBP01127 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.83■□□□□ 0.44
PDGFBP01127 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.83■□□□□ 0.44
PDGFBP01127 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFBP01127 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFBP01127 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PDGFBP01127 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.83■□□□□ 0.44
PDGFBP01127 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.83■□□□□ 0.44
PDGFBP01127 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.83■□□□□ 0.44
PDGFBP01127 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.83■□□□□ 0.44
PDGFBP01127 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFBP01127 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDGFBP01127 AL049757.1-201ENST00000616842 1596 ntBASIC17.83■□□□□ 0.44
PDGFBP01127 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PDGFBP01127 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFBP01127 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDGFBP01127 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFBP01127 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 MIR943-201ENST00000401286 94 ntBASIC17.82■□□□□ 0.44
PDGFBP01127 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFBP01127 KLF4P1-201ENST00000412782 1185 ntBASIC17.82■□□□□ 0.44
PDGFBP01127 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.82■□□□□ 0.44
PDGFBP01127 ADH5P3-201ENST00000433842 1137 ntBASIC17.82■□□□□ 0.44
PDGFBP01127 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.82■□□□□ 0.44
PDGFBP01127 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFBP01127 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.82■□□□□ 0.44
PDGFBP01127 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.82■□□□□ 0.44
PDGFBP01127 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFBP01127 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDGFBP01127 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.82■□□□□ 0.44
PDGFBP01127 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PDGFBP01127 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDGFBP01127 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.81■□□□□ 0.44
PDGFBP01127 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PDGFBP01127 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
PDGFBP01127 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFBP01127 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.81■□□□□ 0.44
PDGFBP01127 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFBP01127 AC051619.7-201ENST00000568314 623 ntBASIC17.81■□□□□ 0.44
PDGFBP01127 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFBP01127 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.81■□□□□ 0.44
PDGFBP01127 LINC02560-201ENST00000596379 459 ntBASIC17.81■□□□□ 0.44
PDGFBP01127 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.81■□□□□ 0.44
PDGFBP01127 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFBP01127 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.81■□□□□ 0.44
PDGFBP01127 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDGFBP01127 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDGFBP01127 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PDGFBP01127 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 OR8S1-201ENST00000310194 1080 ntBASIC17.8■□□□□ 0.44
PDGFBP01127 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDGFBP01127 COX5BP2-201ENST00000392354 334 ntBASIC17.8■□□□□ 0.44
PDGFBP01127 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms