Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCA1O95477 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ABCA1O95477 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ABCA1O95477 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ABCA1O95477 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.96□□□□□ -0.01
ABCA1O95477 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCA1O95477 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ABCA1O95477 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCA1O95477 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ABCA1O95477 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.96□□□□□ -0.01
ABCA1O95477 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
ABCA1O95477 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.96□□□□□ -0.01
ABCA1O95477 DNAJB3-202ENST00000449667 1266 ntBASIC14.96□□□□□ -0.01
ABCA1O95477 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCA1O95477 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.96□□□□□ -0.01
ABCA1O95477 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCA1O95477 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCA1O95477 AL691403.2-201ENST00000618460 490 ntBASIC14.96□□□□□ -0.01
ABCA1O95477 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.96□□□□□ -0.02
ABCA1O95477 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ABCA1O95477 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.02
ABCA1O95477 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
ABCA1O95477 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ABCA1O95477 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ABCA1O95477 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.96□□□□□ -0.02
ABCA1O95477 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ABCA1O95477 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
ABCA1O95477 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ABCA1O95477 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ABCA1O95477 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ABCA1O95477 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ABCA1O95477 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.96□□□□□ -0.02
ABCA1O95477 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.95□□□□□ -0.02
ABCA1O95477 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ABCA1O95477 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCA1O95477 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ABCA1O95477 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 RPS2P1-201ENST00000434010 821 ntBASIC14.95□□□□□ -0.02
ABCA1O95477 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.95□□□□□ -0.02
ABCA1O95477 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.95□□□□□ -0.02
ABCA1O95477 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.95□□□□□ -0.02
ABCA1O95477 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 FAM197Y3-203ENST00000618346 717 ntBASIC14.95□□□□□ -0.02
ABCA1O95477 AC134684.3-201ENST00000641758 218 ntBASIC14.95□□□□□ -0.02
ABCA1O95477 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.95□□□□□ -0.02
ABCA1O95477 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCA1O95477 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
ABCA1O95477 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 INTS4P1-201ENST00000438455 1935 ntBASIC14.95□□□□□ -0.02
ABCA1O95477 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
ABCA1O95477 AC112777.1-201ENST00000540175 1423 ntBASIC14.95□□□□□ -0.02
ABCA1O95477 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.95□□□□□ -0.02
ABCA1O95477 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
ABCA1O95477 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.95□□□□□ -0.02
ABCA1O95477 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCA1O95477 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.95□□□□□ -0.02
ABCA1O95477 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ABCA1O95477 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCA1O95477 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
ABCA1O95477 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ABCA1O95477 RCN1P2-201ENST00000398357 915 ntBASIC14.94□□□□□ -0.02
ABCA1O95477 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.94□□□□□ -0.02
ABCA1O95477 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.94□□□□□ -0.02
ABCA1O95477 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.94□□□□□ -0.02
ABCA1O95477 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms