Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ALX3O95076 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ALX3O95076 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
ALX3O95076 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.83■□□□□ 0.13
ALX3O95076 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.83■□□□□ 0.13
ALX3O95076 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.83■□□□□ 0.13
ALX3O95076 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ALX3O95076 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ALX3O95076 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.83■□□□□ 0.13
ALX3O95076 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ALX3O95076 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.83■□□□□ 0.13
ALX3O95076 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ALX3O95076 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
ALX3O95076 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 AC008741.2-201ENST00000612792 3115 ntBASIC15.83■□□□□ 0.12
ALX3O95076 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.83■□□□□ 0.12
ALX3O95076 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.83■□□□□ 0.12
ALX3O95076 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
ALX3O95076 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
ALX3O95076 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ALX3O95076 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ALX3O95076 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.83■□□□□ 0.12
ALX3O95076 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.83■□□□□ 0.12
ALX3O95076 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.83■□□□□ 0.12
ALX3O95076 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ALX3O95076 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.83■□□□□ 0.12
ALX3O95076 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.83■□□□□ 0.12
ALX3O95076 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.83■□□□□ 0.12
ALX3O95076 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
ALX3O95076 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 PCDHB17P-201ENST00000539533 2393 ntBASIC15.83■□□□□ 0.12
ALX3O95076 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ALX3O95076 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ALX3O95076 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.82■□□□□ 0.12
ALX3O95076 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ALX3O95076 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.82■□□□□ 0.12
ALX3O95076 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 AC097488.1-201ENST00000507834 756 ntBASIC15.82■□□□□ 0.12
ALX3O95076 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.82■□□□□ 0.12
ALX3O95076 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 SLC25A1P4-201ENST00000567977 778 ntBASIC15.82■□□□□ 0.12
ALX3O95076 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.82■□□□□ 0.12
ALX3O95076 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.82■□□□□ 0.12
ALX3O95076 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ALX3O95076 AL163051.1-201ENST00000569214 1512 ntBASIC15.82■□□□□ 0.12
ALX3O95076 AC036111.1-201ENST00000533973 1582 ntBASIC15.82■□□□□ 0.12
ALX3O95076 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
ALX3O95076 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
ALX3O95076 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ALX3O95076 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ALX3O95076 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.82■□□□□ 0.12
ALX3O95076 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.82■□□□□ 0.12
ALX3O95076 AC023824.1-201ENST00000562945 2975 ntBASIC15.81■□□□□ 0.12
ALX3O95076 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
ALX3O95076 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ALX3O95076 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms