Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.57■□□□□ 0.56
LRCH4O75427 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
LRCH4O75427 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.57■□□□□ 0.56
LRCH4O75427 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.57■□□□□ 0.56
LRCH4O75427 NTF6B-201ENST00000591913 560 ntBASIC18.57■□□□□ 0.56
LRCH4O75427 AC011498.5-201ENST00000592027 486 ntBASIC18.57■□□□□ 0.56
LRCH4O75427 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.57■□□□□ 0.56
LRCH4O75427 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.57■□□□□ 0.56
LRCH4O75427 AL645608.8-201ENST00000606034 2086 ntBASIC18.57■□□□□ 0.56
LRCH4O75427 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRCH4O75427 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCH4O75427 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 HLA-J-201ENST00000462773 1622 ntBASIC18.56■□□□□ 0.56
LRCH4O75427 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.56■□□□□ 0.56
LRCH4O75427 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.56■□□□□ 0.56
LRCH4O75427 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.56■□□□□ 0.56
LRCH4O75427 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.56■□□□□ 0.56
LRCH4O75427 RN7SL606P-201ENST00000472779 293 ntBASIC18.56■□□□□ 0.56
LRCH4O75427 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.56■□□□□ 0.56
LRCH4O75427 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.56■□□□□ 0.56
LRCH4O75427 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.56■□□□□ 0.56
LRCH4O75427 AL121956.5-201ENST00000625261 221 ntBASIC18.56■□□□□ 0.56
LRCH4O75427 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.56■□□□□ 0.56
LRCH4O75427 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.56■□□□□ 0.56
LRCH4O75427 AC141586.5-201ENST00000624546 2050 ntBASIC18.56■□□□□ 0.56
LRCH4O75427 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCH4O75427 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LRCH4O75427 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LRCH4O75427 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.55■□□□□ 0.56
LRCH4O75427 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LRCH4O75427 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.55■□□□□ 0.56
LRCH4O75427 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.55■□□□□ 0.56
LRCH4O75427 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
LRCH4O75427 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.55■□□□□ 0.56
LRCH4O75427 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LRCH4O75427 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRCH4O75427 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.55■□□□□ 0.56
LRCH4O75427 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.55■□□□□ 0.56
LRCH4O75427 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.55■□□□□ 0.56
LRCH4O75427 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 AC005332.1-201ENST00000577698 1310 ntBASIC18.54■□□□□ 0.56
LRCH4O75427 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
LRCH4O75427 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.54■□□□□ 0.56
LRCH4O75427 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.54■□□□□ 0.56
LRCH4O75427 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.54■□□□□ 0.56
LRCH4O75427 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.54■□□□□ 0.56
LRCH4O75427 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.54■□□□□ 0.56
LRCH4O75427 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRCH4O75427 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.54■□□□□ 0.56
LRCH4O75427 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.54■□□□□ 0.56
LRCH4O75427 LINC01451-201ENST00000623792 534 ntBASIC18.54■□□□□ 0.56
LRCH4O75427 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.54■□□□□ 0.56
LRCH4O75427 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.54■□□□□ 0.56
LRCH4O75427 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.54■□□□□ 0.56
LRCH4O75427 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.54■□□□□ 0.56
LRCH4O75427 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LRCH4O75427 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRCH4O75427 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms