Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC22.36■■□□□ 1.17
CACNA1FO60840 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
CACNA1FO60840 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.36■■□□□ 1.17
CACNA1FO60840 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CACNA1FO60840 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CACNA1FO60840 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CACNA1FO60840 AC133963.1-201ENST00000504166 1679 ntBASIC22.35■■□□□ 1.17
CACNA1FO60840 AC004817.3-201ENST00000602957 2129 ntBASIC22.35■■□□□ 1.17
CACNA1FO60840 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
CACNA1FO60840 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.35■■□□□ 1.17
CACNA1FO60840 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CACNA1FO60840 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CACNA1FO60840 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CACNA1FO60840 AC003669.1-201ENST00000334569 611 ntBASIC22.35■■□□□ 1.17
CACNA1FO60840 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.35■■□□□ 1.17
CACNA1FO60840 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CACNA1FO60840 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC22.35■■□□□ 1.17
CACNA1FO60840 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CACNA1FO60840 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.35■■□□□ 1.17
CACNA1FO60840 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC22.35■■□□□ 1.17
CACNA1FO60840 AC148477.8-201ENST00000624298 468 ntBASIC22.35■■□□□ 1.17
CACNA1FO60840 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CACNA1FO60840 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CACNA1FO60840 AC134043.2-201ENST00000624206 2238 ntBASIC22.35■■□□□ 1.17
CACNA1FO60840 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC22.35■■□□□ 1.17
CACNA1FO60840 LYSMD4-203ENST00000378904 2122 ntBASIC22.35■■□□□ 1.17
CACNA1FO60840 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 FUOM-202ENST00000368551 628 ntTSL 3 BASIC22.34■■□□□ 1.17
CACNA1FO60840 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.34■■□□□ 1.17
CACNA1FO60840 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.34■■□□□ 1.17
CACNA1FO60840 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 NKAPP1-205ENST00000585790 367 ntBASIC22.34■■□□□ 1.17
CACNA1FO60840 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.34■■□□□ 1.17
CACNA1FO60840 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CACNA1FO60840 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 AC073648.2-201ENST00000510116 352 ntBASIC22.34■■□□□ 1.17
CACNA1FO60840 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.34■■□□□ 1.17
CACNA1FO60840 AP000867.4-201ENST00000641616 219 ntBASIC22.34■■□□□ 1.17
CACNA1FO60840 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CACNA1FO60840 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.34■■□□□ 1.17
CACNA1FO60840 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.33■■□□□ 1.17
CACNA1FO60840 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CACNA1FO60840 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CACNA1FO60840 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.33■■□□□ 1.17
CACNA1FO60840 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CACNA1FO60840 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CACNA1FO60840 KRT18P27-201ENST00000427733 1299 ntBASIC22.33■■□□□ 1.17
CACNA1FO60840 HNRNPDP1-201ENST00000439535 754 ntBASIC22.33■■□□□ 1.17
CACNA1FO60840 PRYP5-201ENST00000451909 266 ntBASIC22.33■■□□□ 1.17
CACNA1FO60840 AF186996.4-201ENST00000467186 377 ntBASIC22.33■■□□□ 1.17
CACNA1FO60840 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CACNA1FO60840 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.33■■□□□ 1.17
CACNA1FO60840 AC139887.3-201ENST00000568585 713 ntBASIC22.33■■□□□ 1.17
CACNA1FO60840 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CACNA1FO60840 AC243591.1-201ENST00000452967 1364 ntBASIC22.33■■□□□ 1.16
CACNA1FO60840 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CACNA1FO60840 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CACNA1FO60840 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CACNA1FO60840 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.32■■□□□ 1.16
CACNA1FO60840 MED22-202ENST00000371999 987 ntTSL 3 BASIC22.32■■□□□ 1.16
CACNA1FO60840 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 AC132008.2-207ENST00000454517 770 ntBASIC22.32■■□□□ 1.16
CACNA1FO60840 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.32■■□□□ 1.16
CACNA1FO60840 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.32■■□□□ 1.16
CACNA1FO60840 LINC01711-201ENST00000598340 967 ntBASIC22.32■■□□□ 1.16
CACNA1FO60840 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.32■■□□□ 1.16
CACNA1FO60840 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CACNA1FO60840 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.32■■□□□ 1.16
CACNA1FO60840 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.32■■□□□ 1.16
CACNA1FO60840 AC068880.1-201ENST00000507289 2297 ntBASIC22.32■■□□□ 1.16
CACNA1FO60840 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
CACNA1FO60840 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC22.32■■□□□ 1.16
CACNA1FO60840 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC22.32■■□□□ 1.16
CACNA1FO60840 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.32■■□□□ 1.16
CACNA1FO60840 AL671883.3-201ENST00000603274 991 ntBASIC22.32■■□□□ 1.16
CACNA1FO60840 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNA1FO60840 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms