Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 AC233263.1-201ENST00000578059 224 ntBASIC14.59□□□□□ -0.07
SSSCA1O60232 AC008403.3-201ENST00000598924 454 ntBASIC14.59□□□□□ -0.07
SSSCA1O60232 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSSCA1O60232 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.59□□□□□ -0.07
SSSCA1O60232 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSSCA1O60232 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSSCA1O60232 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.59□□□□□ -0.07
SSSCA1O60232 LINC01126-201ENST00000623515 1646 ntBASIC14.59□□□□□ -0.07
SSSCA1O60232 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.07
SSSCA1O60232 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSSCA1O60232 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSSCA1O60232 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
SSSCA1O60232 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSSCA1O60232 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.58□□□□□ -0.08
SSSCA1O60232 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SSSCA1O60232 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.58□□□□□ -0.08
SSSCA1O60232 AC008040.2-201ENST00000461049 708 ntBASIC14.58□□□□□ -0.08
SSSCA1O60232 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
SSSCA1O60232 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.58□□□□□ -0.08
SSSCA1O60232 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.58□□□□□ -0.08
SSSCA1O60232 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.58□□□□□ -0.08
SSSCA1O60232 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.58□□□□□ -0.08
SSSCA1O60232 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.58□□□□□ -0.08
SSSCA1O60232 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SSSCA1O60232 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
SSSCA1O60232 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
SSSCA1O60232 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.58□□□□□ -0.08
SSSCA1O60232 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.58□□□□□ -0.08
SSSCA1O60232 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.58□□□□□ -0.08
SSSCA1O60232 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.58□□□□□ -0.08
SSSCA1O60232 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.58□□□□□ -0.08
SSSCA1O60232 AC100803.2-201ENST00000562459 1963 ntBASIC14.58□□□□□ -0.08
SSSCA1O60232 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.58□□□□□ -0.08
SSSCA1O60232 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSSCA1O60232 KRT16P1-201ENST00000399124 1418 ntBASIC14.58□□□□□ -0.08
SSSCA1O60232 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SSSCA1O60232 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 AC106886.4-201ENST00000623557 2502 ntBASIC14.57□□□□□ -0.08
SSSCA1O60232 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
SSSCA1O60232 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
SSSCA1O60232 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SSSCA1O60232 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SSSCA1O60232 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.57□□□□□ -0.08
SSSCA1O60232 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
SSSCA1O60232 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.57□□□□□ -0.08
SSSCA1O60232 KSR1P1-201ENST00000446298 240 ntBASIC14.57□□□□□ -0.08
SSSCA1O60232 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.57□□□□□ -0.08
SSSCA1O60232 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 AC026271.3-201ENST00000571884 352 ntBASIC14.57□□□□□ -0.08
SSSCA1O60232 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.57□□□□□ -0.08
SSSCA1O60232 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SSSCA1O60232 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms