Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
SSNA1O43805 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
SSNA1O43805 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSNA1O43805 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.24■□□□□ 0.03
SSNA1O43805 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SSNA1O43805 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.24■□□□□ 0.03
SSNA1O43805 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SSNA1O43805 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.24■□□□□ 0.03
SSNA1O43805 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.24■□□□□ 0.03
SSNA1O43805 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SSNA1O43805 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.24■□□□□ 0.03
SSNA1O43805 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.24■□□□□ 0.03
SSNA1O43805 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 KRT17P1-201ENST00000399211 1546 ntBASIC15.24■□□□□ 0.03
SSNA1O43805 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.24■□□□□ 0.03
SSNA1O43805 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SSNA1O43805 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 AC073210.2-201ENST00000430369 194 ntBASIC15.24■□□□□ 0.03
SSNA1O43805 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 KRT18P14-201ENST00000534205 1250 ntBASIC15.24■□□□□ 0.03
SSNA1O43805 AL160286.2-201ENST00000567150 934 ntBASIC15.24■□□□□ 0.03
SSNA1O43805 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.24■□□□□ 0.03
SSNA1O43805 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 AC005181.1-201ENST00000604782 1256 ntBASIC15.24■□□□□ 0.03
SSNA1O43805 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SSNA1O43805 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SSNA1O43805 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SSNA1O43805 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
SSNA1O43805 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSNA1O43805 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SSNA1O43805 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SSNA1O43805 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SSNA1O43805 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SSNA1O43805 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.23■□□□□ 0.03
SSNA1O43805 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.23■□□□□ 0.03
SSNA1O43805 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.23■□□□□ 0.03
SSNA1O43805 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SSNA1O43805 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.23■□□□□ 0.03
SSNA1O43805 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
SSNA1O43805 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SSNA1O43805 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.23■□□□□ 0.03
SSNA1O43805 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 AC068338.2-201ENST00000563278 1430 ntBASIC15.23■□□□□ 0.03
SSNA1O43805 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SSNA1O43805 AC132872.4-202ENST00000622924 2756 ntBASIC15.23■□□□□ 0.03
SSNA1O43805 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SSNA1O43805 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSNA1O43805 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.22■□□□□ 0.03
SSNA1O43805 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.22■□□□□ 0.03
SSNA1O43805 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.22■□□□□ 0.03
SSNA1O43805 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SSNA1O43805 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.22■□□□□ 0.03
SSNA1O43805 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms