Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 LINC01126-201ENST00000623515 1646 ntBASIC12.78□□□□□ -0.36
PAX4O43316 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
PAX4O43316 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.78□□□□□ -0.36
PAX4O43316 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
PAX4O43316 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.78□□□□□ -0.36
PAX4O43316 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.78□□□□□ -0.36
PAX4O43316 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
PAX4O43316 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.78□□□□□ -0.36
PAX4O43316 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.78□□□□□ -0.36
PAX4O43316 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PAX4O43316 PHGDH-209ENST00000641074 1780 ntBASIC12.78□□□□□ -0.36
PAX4O43316 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.78□□□□□ -0.36
PAX4O43316 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
PAX4O43316 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PAX4O43316 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.78□□□□□ -0.36
PAX4O43316 LINC01311-201ENST00000565162 1445 ntBASIC12.78□□□□□ -0.36
PAX4O43316 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC12.78□□□□□ -0.36
PAX4O43316 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
PAX4O43316 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
PAX4O43316 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
PAX4O43316 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
PAX4O43316 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
PAX4O43316 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PAX4O43316 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
PAX4O43316 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PAX4O43316 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PAX4O43316 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PAX4O43316 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
PAX4O43316 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
PAX4O43316 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PAX4O43316 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PAX4O43316 AL133373.2-201ENST00000623187 2828 ntBASIC12.77□□□□□ -0.36
PAX4O43316 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.77□□□□□ -0.36
PAX4O43316 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.77□□□□□ -0.36
PAX4O43316 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
PAX4O43316 PCDHB18P-201ENST00000524813 2368 ntBASIC12.77□□□□□ -0.36
PAX4O43316 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.77□□□□□ -0.37
PAX4O43316 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 KRT18P38-201ENST00000449496 1282 ntBASIC12.77□□□□□ -0.37
PAX4O43316 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.77□□□□□ -0.37
PAX4O43316 AC092597.1-201ENST00000487352 616 ntBASIC12.77□□□□□ -0.37
PAX4O43316 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.77□□□□□ -0.37
PAX4O43316 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.77□□□□□ -0.37
PAX4O43316 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.77□□□□□ -0.37
PAX4O43316 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.77□□□□□ -0.37
PAX4O43316 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.77□□□□□ -0.37
PAX4O43316 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.77□□□□□ -0.37
PAX4O43316 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
PAX4O43316 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.77□□□□□ -0.37
PAX4O43316 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.77□□□□□ -0.37
PAX4O43316 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.77□□□□□ -0.37
PAX4O43316 REXO1L9P-201ENST00000604264 2108 ntBASIC12.77□□□□□ -0.37
PAX4O43316 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
PAX4O43316 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.77□□□□□ -0.37
PAX4O43316 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.77□□□□□ -0.37
PAX4O43316 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.77□□□□□ -0.37
PAX4O43316 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 AC063926.3-201ENST00000624734 5658 ntBASIC12.77□□□□□ -0.37
PAX4O43316 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PAX4O43316 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.77□□□□□ -0.37
PAX4O43316 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PAX4O43316 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PAX4O43316 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PAX4O43316 AL096828.2-201ENST00000567259 1965 ntBASIC12.76□□□□□ -0.37
PAX4O43316 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
PAX4O43316 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
PAX4O43316 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
PAX4O43316 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
PAX4O43316 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.76□□□□□ -0.37
PAX4O43316 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
PAX4O43316 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms