Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.15■□□□□ 0.18
SURF4O15260 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.15■□□□□ 0.18
SURF4O15260 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.15■□□□□ 0.18
SURF4O15260 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.15■□□□□ 0.18
SURF4O15260 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.15■□□□□ 0.18
SURF4O15260 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SURF4O15260 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.15■□□□□ 0.18
SURF4O15260 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.14■□□□□ 0.18
SURF4O15260 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SURF4O15260 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SURF4O15260 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.14■□□□□ 0.18
SURF4O15260 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SURF4O15260 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.14■□□□□ 0.17
SURF4O15260 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.14■□□□□ 0.17
SURF4O15260 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SURF4O15260 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.14■□□□□ 0.17
SURF4O15260 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 SEC1P-202ENST00000473944 940 ntBASIC16.14■□□□□ 0.17
SURF4O15260 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.14■□□□□ 0.17
SURF4O15260 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.14■□□□□ 0.17
SURF4O15260 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.14■□□□□ 0.17
SURF4O15260 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.14■□□□□ 0.17
SURF4O15260 AC008687.5-201ENST00000593746 558 ntBASIC16.14■□□□□ 0.17
SURF4O15260 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.14■□□□□ 0.17
SURF4O15260 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.14■□□□□ 0.17
SURF4O15260 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.14■□□□□ 0.17
SURF4O15260 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.14■□□□□ 0.17
SURF4O15260 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 AC011676.5-201ENST00000624864 2660 ntBASIC16.14■□□□□ 0.17
SURF4O15260 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.14■□□□□ 0.17
SURF4O15260 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.14■□□□□ 0.17
SURF4O15260 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.14■□□□□ 0.17
SURF4O15260 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SURF4O15260 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SURF4O15260 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
SURF4O15260 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.14■□□□□ 0.17
SURF4O15260 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SURF4O15260 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.14■□□□□ 0.17
SURF4O15260 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SURF4O15260 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.13■□□□□ 0.17
SURF4O15260 AL390955.1-201ENST00000428694 934 ntBASIC16.13■□□□□ 0.17
SURF4O15260 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.13■□□□□ 0.17
SURF4O15260 TSPY15P-201ENST00000457163 923 ntBASIC16.13■□□□□ 0.17
SURF4O15260 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.13■□□□□ 0.17
SURF4O15260 EGLN1P1-201ENST00000531623 762 ntBASIC16.13■□□□□ 0.17
SURF4O15260 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.13■□□□□ 0.17
SURF4O15260 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.13■□□□□ 0.17
SURF4O15260 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SURF4O15260 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SURF4O15260 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SURF4O15260 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
SURF4O15260 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SURF4O15260 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.13■□□□□ 0.17
SURF4O15260 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.13■□□□□ 0.17
SURF4O15260 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms