Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH17O14917 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH17O14917 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH17O14917 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH17O14917 IGHV3-41-201ENST00000613121 348 ntBASIC17.07■□□□□ 0.32
PCDH17O14917 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH17O14917 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH17O14917 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH17O14917 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH17O14917 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDH17O14917 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH17O14917 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
PCDH17O14917 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH17O14917 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH17O14917 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH17O14917 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH17O14917 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDH17O14917 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH17O14917 AC012313.10-201ENST00000623509 926 ntBASIC17.06■□□□□ 0.32
PCDH17O14917 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDH17O14917 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDH17O14917 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH17O14917 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PCDH17O14917 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH17O14917 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH17O14917 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDH17O14917 GNAS-203ENST00000306120 1878 ntBASIC17.05■□□□□ 0.32
PCDH17O14917 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH17O14917 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH17O14917 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH17O14917 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH17O14917 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDH17O14917 TPSP2-201ENST00000561760 610 ntBASIC17.05■□□□□ 0.32
PCDH17O14917 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDH17O14917 Z69720.1-201ENST00000601483 472 ntBASIC17.05■□□□□ 0.32
PCDH17O14917 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH17O14917 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH17O14917 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PCDH17O14917 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH17O14917 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH17O14917 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH17O14917 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH17O14917 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH17O14917 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms