Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCL21O00585 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CCL21O00585 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 ELK2BP-201ENST00000415014 1224 ntBASIC15.67■□□□□ 0.1
CCL21O00585 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CCL21O00585 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL21O00585 AC108073.2-201ENST00000464002 357 ntBASIC15.67■□□□□ 0.1
CCL21O00585 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CCL21O00585 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.67■□□□□ 0.1
CCL21O00585 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL21O00585 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCL21O00585 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CCL21O00585 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.67■□□□□ 0.1
CCL21O00585 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.67■□□□□ 0.1
CCL21O00585 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CCL21O00585 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCL21O00585 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCL21O00585 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCL21O00585 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CCL21O00585 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CCL21O00585 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL21O00585 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL21O00585 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 COX5BP2-201ENST00000392354 334 ntBASIC15.66■□□□□ 0.1
CCL21O00585 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL21O00585 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.66■□□□□ 0.1
CCL21O00585 CNN2P11-201ENST00000429351 262 ntBASIC15.66■□□□□ 0.1
CCL21O00585 HTR5BP-201ENST00000430851 1154 ntBASIC15.66■□□□□ 0.1
CCL21O00585 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.66■□□□□ 0.1
CCL21O00585 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.66■□□□□ 0.1
CCL21O00585 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL21O00585 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCL21O00585 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.66■□□□□ 0.1
CCL21O00585 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CCL21O00585 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 NCF1C-201ENST00000438382 1427 ntBASIC15.66■□□□□ 0.1
CCL21O00585 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCL21O00585 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCL21O00585 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL21O00585 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL21O00585 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL21O00585 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.65■□□□□ 0.1
CCL21O00585 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL21O00585 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCL21O00585 CYMP-203ENST00000474680 1263 ntBASIC15.65■□□□□ 0.1
CCL21O00585 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL21O00585 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.65■□□□□ 0.1
CCL21O00585 RFPL4AP1-201ENST00000530883 850 ntBASIC15.65■□□□□ 0.1
CCL21O00585 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCL21O00585 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL21O00585 AL078644.1-201ENST00000609881 752 ntBASIC15.65■□□□□ 0.1
CCL21O00585 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.65■□□□□ 0.1
CCL21O00585 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.65■□□□□ 0.1
CCL21O00585 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCL21O00585 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms