Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SOX1O00570 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX1O00570 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX1O00570 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.86■□□□□ 0.61
SOX1O00570 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.86■□□□□ 0.61
SOX1O00570 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX1O00570 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.86■□□□□ 0.61
SOX1O00570 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SOX1O00570 GGTLC5P-201ENST00000617623 998 ntBASIC18.86■□□□□ 0.61
SOX1O00570 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX1O00570 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.86■□□□□ 0.61
SOX1O00570 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.86■□□□□ 0.61
SOX1O00570 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX1O00570 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SOX1O00570 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.85■□□□□ 0.61
SOX1O00570 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SOX1O00570 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SOX1O00570 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SOX1O00570 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SOX1O00570 AC092580.3-201ENST00000430932 139 ntBASIC18.85■□□□□ 0.61
SOX1O00570 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.85■□□□□ 0.61
SOX1O00570 AC004890.2-204ENST00000481968 304 ntBASIC18.85■□□□□ 0.61
SOX1O00570 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.85■□□□□ 0.61
SOX1O00570 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.85■□□□□ 0.61
SOX1O00570 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SOX1O00570 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SOX1O00570 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.85■□□□□ 0.61
SOX1O00570 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.85■□□□□ 0.61
SOX1O00570 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.85■□□□□ 0.61
SOX1O00570 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.85■□□□□ 0.61
SOX1O00570 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SOX1O00570 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SOX1O00570 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 AC132938.5-201ENST00000624980 1813 ntBASIC18.84■□□□□ 0.61
SOX1O00570 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SOX1O00570 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SOX1O00570 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.84■□□□□ 0.61
SOX1O00570 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.84■□□□□ 0.61
SOX1O00570 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.84■□□□□ 0.61
SOX1O00570 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SOX1O00570 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.84■□□□□ 0.61
SOX1O00570 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.84■□□□□ 0.61
SOX1O00570 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.84■□□□□ 0.61
SOX1O00570 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SOX1O00570 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SOX1O00570 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
SOX1O00570 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SOX1O00570 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SOX1O00570 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SOX1O00570 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SOX1O00570 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SOX1O00570 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SOX1O00570 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SOX1O00570 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SOX1O00570 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.83■□□□□ 0.6
SOX1O00570 AC079776.1-201ENST00000401540 1152 ntBASIC18.83■□□□□ 0.6
SOX1O00570 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
SOX1O00570 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SOX1O00570 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.83■□□□□ 0.6
SOX1O00570 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SOX1O00570 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SOX1O00570 AC009118.2-201ENST00000613275 655 ntBASIC18.83■□□□□ 0.6
SOX1O00570 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SOX1O00570 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.83■□□□□ 0.6
SOX1O00570 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SOX1O00570 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SOX1O00570 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.82■□□□□ 0.6
SOX1O00570 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX1O00570 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.82■□□□□ 0.6
SOX1O00570 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SOX1O00570 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SOX1O00570 AC002056.1-201ENST00000395613 760 ntBASIC18.82■□□□□ 0.6
SOX1O00570 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX1O00570 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SOX1O00570 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.82■□□□□ 0.6
SOX1O00570 AC096633.1-201ENST00000422446 749 ntBASIC18.82■□□□□ 0.6
SOX1O00570 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.82■□□□□ 0.6
SOX1O00570 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms