Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 MYLKP1-201ENST00000509077 1580 ntBASIC16.72■□□□□ 0.27
CLCA1A8K7I4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLCA1A8K7I4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.72■□□□□ 0.27
CLCA1A8K7I4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 AC112497.1-201ENST00000624824 639 ntBASIC16.71■□□□□ 0.27
CLCA1A8K7I4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCA1A8K7I4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.71■□□□□ 0.26
CLCA1A8K7I4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.71■□□□□ 0.26
CLCA1A8K7I4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 AL096828.2-201ENST00000567259 1965 ntBASIC16.7■□□□□ 0.26
CLCA1A8K7I4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCA1A8K7I4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA1A8K7I4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms