Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PALM3A6NDB9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.6■□□□□ 0.89
PALM3A6NDB9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PALM3A6NDB9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.6■□□□□ 0.89
PALM3A6NDB9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PALM3A6NDB9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PALM3A6NDB9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PALM3A6NDB9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.6■□□□□ 0.89
PALM3A6NDB9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.6■□□□□ 0.89
PALM3A6NDB9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
PALM3A6NDB9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
PALM3A6NDB9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PALM3A6NDB9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.59■□□□□ 0.89
PALM3A6NDB9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.59■□□□□ 0.89
PALM3A6NDB9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.59■□□□□ 0.89
PALM3A6NDB9 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.59■□□□□ 0.89
PALM3A6NDB9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 AL121894.2-201ENST00000602977 491 ntBASIC20.59■□□□□ 0.89
PALM3A6NDB9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PALM3A6NDB9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PALM3A6NDB9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PALM3A6NDB9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.58■□□□□ 0.89
PALM3A6NDB9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PALM3A6NDB9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PALM3A6NDB9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PALM3A6NDB9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.58■□□□□ 0.89
PALM3A6NDB9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
PALM3A6NDB9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.58■□□□□ 0.89
PALM3A6NDB9 AF238378.1-201ENST00000526806 358 ntBASIC20.58■□□□□ 0.89
PALM3A6NDB9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.58■□□□□ 0.89
PALM3A6NDB9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.58■□□□□ 0.89
PALM3A6NDB9 LINC01711-201ENST00000598340 967 ntBASIC20.58■□□□□ 0.89
PALM3A6NDB9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PALM3A6NDB9 AC006116.8-202ENST00000587620 1550 ntBASIC20.58■□□□□ 0.88
PALM3A6NDB9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PALM3A6NDB9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PALM3A6NDB9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
PALM3A6NDB9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PALM3A6NDB9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.58■□□□□ 0.88
PALM3A6NDB9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.58■□□□□ 0.88
PALM3A6NDB9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.58■□□□□ 0.88
PALM3A6NDB9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.58■□□□□ 0.88
PALM3A6NDB9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PALM3A6NDB9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 AP001269.4-201ENST00000609611 512 ntBASIC20.57■□□□□ 0.88
PALM3A6NDB9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 AC008764.6-201ENST00000595909 2069 ntBASIC20.57■□□□□ 0.88
PALM3A6NDB9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.57■□□□□ 0.88
PALM3A6NDB9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PALM3A6NDB9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 ABCD1P5-201ENST00000445663 754 ntBASIC20.56■□□□□ 0.88
PALM3A6NDB9 SAPCD2P3-201ENST00000455031 850 ntBASIC20.56■□□□□ 0.88
PALM3A6NDB9 AC106795.1-205ENST00000512851 1056 ntBASIC20.56■□□□□ 0.88
PALM3A6NDB9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 AD001527.2-201ENST00000622994 785 ntBASIC20.56■□□□□ 0.88
PALM3A6NDB9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 BX276092.7-203ENST00000637198 1536 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms