Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 NPAP1P7-201ENST00000613027 823 ntBASIC16.97■□□□□ 0.31
LRIT2A6NDA9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.97■□□□□ 0.31
LRIT2A6NDA9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRIT2A6NDA9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.96■□□□□ 0.31
LRIT2A6NDA9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 ATP5G2P1-201ENST00000433580 426 ntBASIC16.96■□□□□ 0.31
LRIT2A6NDA9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 TPSP2-201ENST00000561760 610 ntBASIC16.96■□□□□ 0.31
LRIT2A6NDA9 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 MIR3180-1-201ENST00000580374 94 ntBASIC16.96■□□□□ 0.31
LRIT2A6NDA9 MIR3180-3-201ENST00000584616 94 ntBASIC16.96■□□□□ 0.31
LRIT2A6NDA9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.96■□□□□ 0.31
LRIT2A6NDA9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 AC125634.1-201ENST00000438758 1403 ntBASIC16.96■□□□□ 0.3
LRIT2A6NDA9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.96■□□□□ 0.3
LRIT2A6NDA9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 AC233702.3-201ENST00000578656 1387 ntBASIC16.95■□□□□ 0.3
LRIT2A6NDA9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 VENTXP7-201ENST00000475503 772 ntBASIC16.95■□□□□ 0.3
LRIT2A6NDA9 AC091607.1-201ENST00000490318 1060 ntBASIC16.95■□□□□ 0.3
LRIT2A6NDA9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 AC005336.2-201ENST00000593183 939 ntBASIC16.95■□□□□ 0.3
LRIT2A6NDA9 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRIT2A6NDA9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms