Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 AC073592.3-201ENST00000625118 1834 ntBASIC24.02■■□□□ 1.44
SBNO1A3KN83 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 BCAR1-209ENST00000546196 1340 ntBASIC24.02■■□□□ 1.44
SBNO1A3KN83 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 AC239800.4-201ENST00000603712 296 ntBASIC24.02■■□□□ 1.44
SBNO1A3KN83 AC019129.2-201ENST00000609837 1235 ntBASIC24.02■■□□□ 1.44
SBNO1A3KN83 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.02■■□□□ 1.44
SBNO1A3KN83 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SBNO1A3KN83 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 SLC25A24-204ENST00000569674 2357 ntBASIC24.01■■□□□ 1.43
SBNO1A3KN83 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC24.01■■□□□ 1.43
SBNO1A3KN83 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 AP002414.1-201ENST00000391405 1147 ntBASIC24.01■■□□□ 1.43
SBNO1A3KN83 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SBNO1A3KN83 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC24.01■■□□□ 1.43
SBNO1A3KN83 LSM12-202ENST00000585388 942 ntTSL 3 BASIC24.01■■□□□ 1.43
SBNO1A3KN83 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
SBNO1A3KN83 AC091812.2-201ENST00000619081 385 ntBASIC24.01■■□□□ 1.43
SBNO1A3KN83 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
SBNO1A3KN83 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC24■■□□□ 1.43
SBNO1A3KN83 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC24■■□□□ 1.43
SBNO1A3KN83 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC24■■□□□ 1.43
SBNO1A3KN83 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC24■■□□□ 1.43
SBNO1A3KN83 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC24■■□□□ 1.43
SBNO1A3KN83 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC24■■□□□ 1.43
SBNO1A3KN83 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC24■■□□□ 1.43
SBNO1A3KN83 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC24■■□□□ 1.43
SBNO1A3KN83 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 PHGDH-209ENST00000641074 1780 ntBASIC23.99■■□□□ 1.43
SBNO1A3KN83 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 AC092902.6-201ENST00000641783 218 ntBASIC23.99■■□□□ 1.43
SBNO1A3KN83 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SBNO1A3KN83 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SBNO1A3KN83 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SBNO1A3KN83 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SBNO1A3KN83 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SBNO1A3KN83 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
SBNO1A3KN83 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SBNO1A3KN83 AC074386.1-202ENST00000463561 864 ntBASIC23.98■■□□□ 1.43
SBNO1A3KN83 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SBNO1A3KN83 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
SBNO1A3KN83 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms