Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 AP000347.1-202ENST00000435868 847 ntBASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 DDX43P3-201ENST00000441064 443 ntBASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 AL139288.1-201ENST00000623748 933 ntBASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 AL049757.1-201ENST00000616842 1596 ntBASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMIM28A0A1B0GU29 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
SMIM28A0A1B0GU29 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.08■□□□□ 0.64
SMIM28A0A1B0GU29 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 AC079776.2-201ENST00000641154 1609 ntBASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 AL049840.3-201ENST00000602669 611 ntBASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 FAM215A-202ENST00000632077 792 ntBASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SMIM28A0A1B0GU29 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMIM28A0A1B0GU29 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.06■□□□□ 0.64
SMIM28A0A1B0GU29 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMIM28A0A1B0GU29 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMIM28A0A1B0GU29 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMIM28A0A1B0GU29 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SMIM28A0A1B0GU29 BX276092.7-203ENST00000637198 1536 ntBASIC19.06■□□□□ 0.64
SMIM28A0A1B0GU29 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms