Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 NUDT16P1-203ENST00000513809 620 ntBASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 DUTP2-201ENST00000519164 463 ntBASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV5A0A0B4J249 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV5A0A0B4J249 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV5A0A0B4J249 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV5A0A0B4J249 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV5A0A0B4J249 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.9□□□□□ -0.19
TRAV5A0A0B4J249 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 AP003041.3-201ENST00000527151 707 ntBASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV5A0A0B4J249 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 UBALD1-205ENST00000590891 2641 ntBASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV5A0A0B4J249 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms