Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 AC098818.2-201ENST00000564925 2320 ntBASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 KRT18P58-201ENST00000527480 1120 ntBASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 AC116407.2-201ENST00000613639 860 ntBASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 AC135776.1-201ENST00000319817 2481 ntBASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 TNXA-203ENST00000507684 2038 ntBASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 ZNF259P1-201ENST00000407656 1365 ntBASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV19A0A0A6YYK7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 BX005266.1-201ENST00000473402 457 ntBASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 AC008735.5-201ENST00000623544 497 ntBASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 AL022326.1-202ENST00000641533 845 ntBASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAV19A0A0A6YYK7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 AC092910.1-201ENST00000482027 1129 ntBASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 AC073592.5-201ENST00000624854 528 ntBASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 AC117500.6-201ENST00000624871 588 ntBASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 AC107918.4-202ENST00000641623 219 ntBASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAV19A0A0A6YYK7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
TRAV19A0A0A6YYK7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms