Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV27A0A087WT01 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV27A0A087WT01 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV27A0A087WT01 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV27A0A087WT01 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV27A0A087WT01 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV27A0A087WT01 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV27A0A087WT01 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TRAV27A0A087WT01 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TRAV27A0A087WT01 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 AC087499.1-201ENST00000418141 1075 ntBASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 AC145285.6-201ENST00000604632 637 ntBASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 AL138966.2-201ENST00000621997 464 ntBASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV27A0A087WT01 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AC009949.1-201ENST00000623048 1830 ntBASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AC034232.1-201ENST00000506026 1064 ntBASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRAV27A0A087WT01 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 SIRPAP1-201ENST00000448467 1770 ntBASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 AC133963.1-201ENST00000504166 1679 ntBASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV27A0A087WT01 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms