Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 CALY-203ENST00000368558 825 ntTSL 5 BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 KRT18P2-201ENST00000447938 1258 ntBASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 MIR4751-201ENST00000578027 74 ntBASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 AC093503.3-201ENST00000624917 2352 ntBASIC26.37■■□□□ 1.81
SHANK2Q9UPX8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 METTL21AP1-201ENST00000438852 635 ntBASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 STK19B-204ENST00000512515 211 ntBASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 AP000974.1-201ENST00000623909 2387 ntBASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 AL035633.1-201ENST00000406139 838 ntBASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 AC010507.1-201ENST00000633895 436 ntBASIC26.36■■□□□ 1.81
SHANK2Q9UPX8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 TNXA-203ENST00000507684 2038 ntBASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 AC023274.1-201ENST00000418278 595 ntBASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 ACTG1P4-201ENST00000425123 1122 ntBASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 PRSS29P-201ENST00000440800 595 ntBASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SHANK2Q9UPX8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 AC244107.1-201ENST00000442033 332 ntBASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SHANK2Q9UPX8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 MYCLP1-201ENST00000372451 1075 ntBASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SHANK2Q9UPX8 AP002414.1-201ENST00000391405 1147 ntBASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms