Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 PCDHA12-202ENST00000613593 2588 ntBASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 DUTP2-201ENST00000519164 463 ntBASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 AC112497.1-201ENST00000624824 639 ntBASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 AL024508.2-201ENST00000607749 1894 ntBASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMCC3Q9ULS5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 AL139384.1-201ENST00000612143 3047 ntBASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 AC080080.1-201ENST00000625121 2420 ntBASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 TSPY17P-201ENST00000450329 467 ntBASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 WWOX-216ENST00000569818 525 ntBASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 CR769767.2-201ENST00000622735 460 ntBASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 AC022898.2-201ENST00000616822 1312 ntBASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TMCC3Q9ULS5 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TMCC3Q9ULS5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 AL355355.2-201ENST00000442321 338 ntBASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 AP003041.3-201ENST00000527151 707 ntBASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 AC104390.1-201ENST00000555663 520 ntBASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 AL138688.1-201ENST00000624851 1594 ntBASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMCC3Q9ULS5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms