Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 CALY-203ENST00000368558 825 ntTSL 5 BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 AL031432.2-201ENST00000566714 459 ntBASIC25.55■■□□□ 1.68
STAG3Q9UJ98 AL928711.1-201ENST00000570165 459 ntBASIC25.55■■□□□ 1.68
STAG3Q9UJ98 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 AC148477.5-201ENST00000625164 1645 ntBASIC25.55■■□□□ 1.68
STAG3Q9UJ98 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG3Q9UJ98 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 ADM-208ENST00000534464 1640 ntTSL 2 BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG3Q9UJ98 PTGES2-AS1-201ENST00000443493 2100 ntBASIC25.54■■□□□ 1.68
STAG3Q9UJ98 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG3Q9UJ98 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
STAG3Q9UJ98 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG3Q9UJ98 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC25.53■■□□□ 1.68
STAG3Q9UJ98 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG3Q9UJ98 AC027612.4-201ENST00000605371 583 ntBASIC25.53■■□□□ 1.68
STAG3Q9UJ98 AC004877.2-201ENST00000623941 599 ntBASIC25.53■■□□□ 1.68
STAG3Q9UJ98 AC120498.9-201ENST00000339021 3867 ntBASIC25.53■■□□□ 1.68
STAG3Q9UJ98 AC132938.5-201ENST00000624980 1813 ntBASIC25.53■■□□□ 1.68
STAG3Q9UJ98 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
STAG3Q9UJ98 AL353593.2-201ENST00000602529 1483 ntBASIC25.53■■□□□ 1.68
STAG3Q9UJ98 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 S100A2-206ENST00000497140 697 ntTSL 2 BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 PUS1-205ENST00000535067 838 ntTSL 3 BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 AC093028.1-201ENST00000622998 982 ntBASIC25.52■■□□□ 1.68
STAG3Q9UJ98 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 AC005332.7-201ENST00000614046 2005 ntBASIC25.52■■□□□ 1.68
STAG3Q9UJ98 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC25.52■■□□□ 1.68
STAG3Q9UJ98 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
STAG3Q9UJ98 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 IGLL3P-201ENST00000412472 434 ntBASIC25.51■■□□□ 1.67
STAG3Q9UJ98 KLF4P1-201ENST00000412782 1185 ntBASIC25.51■■□□□ 1.67
STAG3Q9UJ98 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 SIGLEC30P-201ENST00000455569 941 ntBASIC25.51■■□□□ 1.67
STAG3Q9UJ98 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 SMN2-210ENST00000511812 867 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 PDPK2P-202ENST00000562415 1191 ntBASIC25.51■■□□□ 1.67
STAG3Q9UJ98 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 BCAR1-209ENST00000546196 1340 ntBASIC25.51■■□□□ 1.67
STAG3Q9UJ98 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 ANO7L1-203ENST00000602586 1720 ntBASIC25.51■■□□□ 1.67
STAG3Q9UJ98 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
STAG3Q9UJ98 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 TSEN15P1-201ENST00000423257 515 ntBASIC25.5■■□□□ 1.67
STAG3Q9UJ98 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC25.5■■□□□ 1.67
STAG3Q9UJ98 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms