Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 KRT18P1-202ENST00000452408 1331 ntBASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 AC090616.6-201ENST00000582640 721 ntBASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 LINC01711-201ENST00000598340 967 ntBASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKIPSDQ9NZQ3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 AC034236.2-201ENST00000606662 1610 ntBASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 DRAXINP1-201ENST00000437611 948 ntBASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 AP002383.4-201ENST00000442518 975 ntBASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKIPSDQ9NZQ3 GMCL1P1-201ENST00000463439 1581 ntBASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 KRT8P50-201ENST00000562022 1438 ntBASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NCKIPSDQ9NZQ3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 PVRIG2P-201ENST00000435460 978 ntBASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 RN7SL510P-201ENST00000581311 263 ntBASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 LINC00896-202ENST00000609602 2128 ntBASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 AC099343.3-201ENST00000605834 2503 ntBASIC18.08■□□□□ 0.48
NCKIPSDQ9NZQ3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms