Protein–RNA interactions for Protein: Q9NYZ1

TVP23B, Golgi apparatus membrane protein TVP23 homolog B, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23BQ9NYZ1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TVP23BQ9NYZ1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 AL135905.2-201ENST00000584934 1404 ntBASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 FER1L4-210ENST00000615531 5998 ntBASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TVP23BQ9NYZ1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 AL359736.2-201ENST00000621992 437 ntBASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 CR769767.2-201ENST00000622735 460 ntBASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 AC132938.6-201ENST00000623828 1655 ntBASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.29■□□□□ 0.2
TVP23BQ9NYZ1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 AC104390.1-201ENST00000555663 520 ntBASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.28■□□□□ 0.2
TVP23BQ9NYZ1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms