Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.07■□□□□ 0.64
CISHQ9NSE2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CISHQ9NSE2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CISHQ9NSE2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 AC233702.3-201ENST00000578656 1387 ntBASIC19.06■□□□□ 0.64
CISHQ9NSE2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 LINC00265-3P-201ENST00000447588 903 ntBASIC19.06■□□□□ 0.64
CISHQ9NSE2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CISHQ9NSE2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CISHQ9NSE2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CISHQ9NSE2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CISHQ9NSE2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CISHQ9NSE2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CISHQ9NSE2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CISHQ9NSE2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CISHQ9NSE2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CISHQ9NSE2 AC096633.1-201ENST00000422446 749 ntBASIC19.04■□□□□ 0.64
CISHQ9NSE2 AC125634.1-201ENST00000438758 1403 ntBASIC19.04■□□□□ 0.64
CISHQ9NSE2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 VENTXP7-201ENST00000475503 772 ntBASIC19.04■□□□□ 0.64
CISHQ9NSE2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 AC092329.2-201ENST00000598402 547 ntBASIC19.04■□□□□ 0.64
CISHQ9NSE2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CISHQ9NSE2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CISHQ9NSE2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms