Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 AC116407.2-201ENST00000613639 860 ntBASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 AL138966.2-201ENST00000621997 464 ntBASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRTM1Q9HBL6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
LRTM1Q9HBL6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRTM1Q9HBL6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LRTM1Q9HBL6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LRTM1Q9HBL6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 AC024563.2-201ENST00000603282 481 ntBASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 AL023806.1-201ENST00000603994 1649 ntBASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.2■□□□□ 0.34
LRTM1Q9HBL6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 AC145285.6-201ENST00000604632 637 ntBASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 AL023973.1-201ENST00000624619 620 ntBASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRTM1Q9HBL6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms