Protein–RNA interactions for Protein: Q9H9E3

COG4, Conserved oligomeric Golgi complex subunit 4, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COG4Q9H9E3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COG4Q9H9E3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COG4Q9H9E3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COG4Q9H9E3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 PVRIG2P-201ENST00000435460 978 ntBASIC18.03■□□□□ 0.48
COG4Q9H9E3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 AC092597.1-201ENST00000487352 616 ntBASIC18.03■□□□□ 0.48
COG4Q9H9E3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.03■□□□□ 0.48
COG4Q9H9E3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.03■□□□□ 0.48
COG4Q9H9E3 AC079602.3-201ENST00000623931 403 ntBASIC18.03■□□□□ 0.48
COG4Q9H9E3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.03■□□□□ 0.48
COG4Q9H9E3 SDHAP2-201ENST00000455183 2001 ntBASIC18.03■□□□□ 0.48
COG4Q9H9E3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COG4Q9H9E3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 AC012317.2-201ENST00000623305 2251 ntBASIC18.02■□□□□ 0.48
COG4Q9H9E3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 AL671277.2-201ENST00000458060 996 ntBASIC18.02■□□□□ 0.48
COG4Q9H9E3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 AL136038.4-201ENST00000603606 1261 ntBASIC18.02■□□□□ 0.48
COG4Q9H9E3 HYMAI.1-201ENST00000620949 238 ntBASIC18.02■□□□□ 0.48
COG4Q9H9E3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.02■□□□□ 0.48
COG4Q9H9E3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COG4Q9H9E3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COG4Q9H9E3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
COG4Q9H9E3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COG4Q9H9E3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COG4Q9H9E3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.02■□□□□ 0.47
COG4Q9H9E3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COG4Q9H9E3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
COG4Q9H9E3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 KRT18P35-201ENST00000510488 1269 ntBASIC18.01■□□□□ 0.47
COG4Q9H9E3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 AL645608.8-201ENST00000606034 2086 ntBASIC18.01■□□□□ 0.47
COG4Q9H9E3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.01■□□□□ 0.47
COG4Q9H9E3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.01■□□□□ 0.47
COG4Q9H9E3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COG4Q9H9E3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms