Protein–RNA interactions for Protein: Q9H2L4

TMEM60, Transmembrane protein 60, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM60Q9H2L4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TMEM60Q9H2L4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 AC010460.3-201ENST00000511359 1579 ntBASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 REXO1L11P-201ENST00000620964 1927 ntBASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 AC092119.3-201ENST00000612618 583 ntBASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 AC093458.2-201ENST00000623150 629 ntBASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TMEM60Q9H2L4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 LINC00896-202ENST00000609602 2128 ntBASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 AL355312.1-201ENST00000407115 2176 ntBASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 AC096633.1-201ENST00000422446 749 ntBASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 UPK3BP1-201ENST00000428678 509 ntBASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 ATP5G2P1-201ENST00000433580 426 ntBASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 AC011840.4-201ENST00000578471 627 ntBASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 AC233702.3-201ENST00000578656 1387 ntBASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 AC125634.1-201ENST00000438758 1403 ntBASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TMEM60Q9H2L4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 TOB2P1-201ENST00000469761 992 ntBASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 AL138831.2-201ENST00000606564 490 ntBASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TMEM60Q9H2L4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms