Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF38Q9H0F5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 AC073648.2-201ENST00000510116 352 ntBASIC18.48■□□□□ 0.55
RNF38Q9H0F5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 AC120114.3-201ENST00000611923 658 ntBASIC18.48■□□□□ 0.55
RNF38Q9H0F5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 AL356309.3-201ENST00000624132 1934 ntBASIC18.48■□□□□ 0.55
RNF38Q9H0F5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF38Q9H0F5 IL9RP2-201ENST00000423948 1312 ntBASIC18.48■□□□□ 0.55
RNF38Q9H0F5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 AP000997.3-201ENST00000623333 2250 ntBASIC18.47■□□□□ 0.55
RNF38Q9H0F5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 AC122714.2-201ENST00000502787 707 ntBASIC18.47■□□□□ 0.55
RNF38Q9H0F5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 NKAPP1-205ENST00000585790 367 ntBASIC18.47■□□□□ 0.55
RNF38Q9H0F5 FAM215A-202ENST00000632077 792 ntBASIC18.47■□□□□ 0.55
RNF38Q9H0F5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.47■□□□□ 0.55
RNF38Q9H0F5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF38Q9H0F5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 AC243591.1-201ENST00000452967 1364 ntBASIC18.46■□□□□ 0.55
RNF38Q9H0F5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 COX5BP2-201ENST00000392354 334 ntBASIC18.46■□□□□ 0.55
RNF38Q9H0F5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 AD001527.2-201ENST00000622994 785 ntBASIC18.46■□□□□ 0.55
RNF38Q9H0F5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF38Q9H0F5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms