Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.58■■□□□ 1.05
RTFDC1Q9BY42 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 GPR89P-201ENST00000407924 1495 ntBASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.58■■□□□ 1.04
RTFDC1Q9BY42 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTFDC1Q9BY42 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AL645939.2-201ENST00000427340 991 ntBASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AC019129.2-201ENST00000609837 1235 ntBASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AL805961.1-202ENST00000641562 540 ntBASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 AC073592.3-201ENST00000625118 1834 ntBASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTFDC1Q9BY42 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 AC003669.1-201ENST00000334569 611 ntBASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 SIGLEC30P-201ENST00000455569 941 ntBASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 AP002472.1-201ENST00000577490 586 ntBASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 AL078644.1-201ENST00000609881 752 ntBASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RTFDC1Q9BY42 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTFDC1Q9BY42 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms