Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 MIR149-201ENST00000384879 89 ntBASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 HMGA1P5-201ENST00000412453 271 ntBASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 AC009947.2-201ENST00000444014 672 ntBASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CHRDL1Q9BU40 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 TNRC18P3-201ENST00000441896 2691 ntBASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 AC087499.1-201ENST00000418141 1075 ntBASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 AC104390.1-201ENST00000555663 520 ntBASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 REXO1L9P-201ENST00000604264 2108 ntBASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.22□□□□□ -0.13
CHRDL1Q9BU40 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 KRT18P22-201ENST00000402024 1347 ntBASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 AC009053.2-201ENST00000563701 2365 ntBASIC14.21□□□□□ -0.13
CHRDL1Q9BU40 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms