Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
LIMD2Q9BT23 AC008556.1-201ENST00000610908 2040 ntBASIC10.68□□□□□ -0.7
LIMD2Q9BT23 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 GXYLT1P6-201ENST00000456472 1187 ntBASIC10.68□□□□□ -0.7
LIMD2Q9BT23 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 Z99916.2-201ENST00000604037 246 ntBASIC10.68□□□□□ -0.7
LIMD2Q9BT23 AC010653.2-201ENST00000623505 997 ntBASIC10.68□□□□□ -0.7
LIMD2Q9BT23 GLDC-219ENST00000640208 420 ntTSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 GPAT2P1-201ENST00000444924 1672 ntBASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 USP49-202ENST00000373010 2446 ntTSL 5 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC10.68□□□□□ -0.7
LIMD2Q9BT23 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LIMD2Q9BT23 MIR1238-201ENST00000408483 83 ntBASIC10.67□□□□□ -0.7
LIMD2Q9BT23 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms